Pantoea anthophila: OJ965_20040
Help
Entry
OJ965_20040 CDS
T08866
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pano
Pantoea anthophila
Pathway
pano03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OJ965_20040 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pano03019
]
OJ965_20040 (recQ)
03400 DNA repair and recombination proteins [BR:
pano03400
]
OJ965_20040 (recQ)
Enzymes [BR:
pano01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OJ965_20040 (recQ)
Messenger RNA biogenesis [BR:
pano03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OJ965_20040 (recQ)
DNA repair and recombination proteins [BR:
pano03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OJ965_20040 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UZH02922
LinkDB
All DBs
Position
complement(3766080..3767906)
Genome browser
AA seq
608 aa
AA seq
DB search
MATSAVLNQEALAQQVLQDTFGYQQFRPGQQTIINQALSGRDCLVVMPTGGGKSLCYQIP
ALVREGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTMTREQQQTVMADCRTGRVKLLY
IAPERLMMDNFLDNLAHWQPVMLAVDEAHCISQWGHDFRPEYGALGRLRERFPEVPVMAL
TATADETTRNDIVNLLHMQDPLIQISSFDRPNIRYTLVEKFKPTDQLLRYVQDQRGKCGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSEQRARVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKVPGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQPCDNCDICLDPPKRYDGLVEAQKAL
SGIYRVGQRFGMGYIVEVLRGSNNQRIREQGHDKLPVYGLGKDQSHEHWVSVLRQLIHLG
LVTQNIAMHSALQLTEAARPVLRGEVPLMLAVPRLITAKTKSSSPAKFHGGNYDRKLFAK
LRKLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGHRKLERFGKPFLVM
IKEHLDEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacctcggcagttctcaatcaggaagcgctggcgcagcaggtattgcaggatacc
ttcggctaccagcagtttcgtcccggtcagcagacgatcatcaatcaggcgctgagcggg
cgcgattgtctggtggtcatgcccaccggcggcggtaaatcgctctgctatcagatcccg
gcgctggtgcgcgaaggcctgacgctggtggtctcgccgctgatctcactgatgaaagat
caggtcgatcagctgctggcaaacggcgtggccgcggcgtgtctcaactccaccatgacg
cgcgaacagcagcagacggtgatggctgactgccgcaccggtcgggtgaagcttctctat
atcgcccctgaacgcctgatgatggataacttcctggacaatctggcacactggcagcct
gtgatgctggcggtggatgaggcgcactgtatctcgcagtgggggcacgatttccgtccg
gaatatggcgcgctgggccggttgcgtgaacgcttcccggaggtgccggtgatggcgctg
accgcgaccgccgatgaaaccacccgtaacgacatcgttaacctgctgcacatgcaggac
ccgctgatccagatcagcagcttcgaccgtcccaatatccgctacaccctggtggaaaaa
tttaagcccaccgatcagctgctgcgctacgtgcaggatcagcgcggcaagtgcggcatt
atctactgcaacagccgggcgaaggtggaagacaccgccgcgcgcctgcagagccggggg
ctgagcgtcggggcctatcatgccggtatcgacagcgaacagcgcgccagagtgcaggaa
gcgtttcagcgtgacgatctgcaaatcgtggtggcgacggtggcctttgggatgggcatc
aacaagcccaacgtccggtttgtggttcactttgatatcccgcgcaatatcgaatcctat
taccaggaaaccggccgtgccggccgtgatggtctgcccgccgaggcgatgatgctttac
gacccggcagatatggcctggctgcgtaagtgtctggaagagaaagtgccggggccgctg
caggatattgaacgccataagctcaacgccatgggcgcgtttgcagaagcgcagacctgc
cgccgcctcgtgctgctcaactactttggtgaggggcgccagcagccgtgcgataactgc
gatatctgtctcgatccgcctaaacggtatgatggtctggtcgaggcgcagaaggcgctc
tccggcatctaccgcgtggggcagcgtttcggcatgggctatattgtggaggtgctgcgc
ggctccaacaatcagcgtatccgggaacagggccatgacaaactgccggtctatggactc
ggcaaagatcagagccacgagcactgggtcagcgtgttacgtcagttgattcatctgggg
ctggtcacacagaacattgccatgcattcggcgctgcagctgaccgaagccgcccgcccg
gtgctgcgcggtgaagtccccctgatgctggcggtgccgcgcctgattaccgcgaagacg
aagagcagcagtccggcgaagtttcacggtggcaactacgatcgcaagctctttgccaag
ctgcgtaagctgcgaaaagcgattgccgatgaagagaatattccgccttacgtggtgttc
aatgacgccacactgattgaaatggcagaacagatgccggtcagcgcgtcagagatgctc
agcgtcaatggcgtgggtcaccgcaaactggagcgctttggcaaacctttcctggtgatg
atcaaagagcatctcgatgaagagtaa
DBGET
integrated database retrieval system
