Pantoea anthophila: OJ965_20185
Help
Entry
OJ965_20185 CDS
T08866
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pano
Pantoea anthophila
Pathway
pano00521
Streptomycin biosynthesis
pano00523
Polyketide sugar unit biosynthesis
pano00525
Acarbose and validamycin biosynthesis
pano00541
Biosynthesis of various nucleotide sugars
pano01100
Metabolic pathways
pano01110
Biosynthesis of secondary metabolites
pano01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OJ965_20185 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OJ965_20185 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
OJ965_20185 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OJ965_20185 (rfbB)
00525 Acarbose and validamycin biosynthesis
OJ965_20185 (rfbB)
Enzymes [BR:
pano01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OJ965_20185 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Sacchrp_dh_NADP
adh_short
KR
NAD_binding_8
NAD_binding_10
DUF6641
Motif
Other DBs
NCBI-ProteinID:
UZH02946
LinkDB
All DBs
Position
complement(3794412..3795482)
Genome browser
AA seq
356 aa
AA seq
DB search
MRRFLITGGAGFIGSALVRFLIAETDHQVVVVDKLSYAGNLASLASVADSPRFHFEQVDI
CDRPALDQVFARYQPDCVMHLAAESHVDRSIDGPVAFIETNIVGTYQLLEAARFYWQKLD
DARKNAFLFHHISTDEVFGDLHDSQAYFTEITPYAPSSPYAASKASSDHLVRAWLRTYGL
PALVTNCSNNYGPCHFPEKLIPLTIINALAGKPLPVYGNGQQIRDWLYVEDHARALYQVV
SQGKPGETYNIGGHNERRNIEVVETICSLLEELAAERKPAGLAHFRDLITYVTDRPGHDL
RYAIDASKIAHELGWKPQETFESGMRKTVAWYLANSSWWQAILDGRYQGERLGLSQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttttctgatcaccggtggtgccgggtttatcggttcggcactggtgcgcttt
ctgatcgcagaaaccgatcatcaggtagtggtggttgataaactcagttacgccggaaat
ctggcctcactcgccagtgttgccgactcgccgcgctttcattttgagcaggtggatatc
tgcgatcgtccggcgctcgatcaggtttttgcccgttatcagccagactgcgtgatgcat
cttgcggctgagagccacgttgatcgttcaatagatggcccggtggcctttatcgaaacc
aatattgtcgggacctatcagttgctggaagcggcacgtttctactggcagaagctggat
gatgcgcgcaaaaacgcctttctgttccaccatatctcgaccgatgaagtctttggcgac
ctgcatgacagccaggcttacttcaccgaaatcacgccttatgctcccagcagtccttac
gccgccagtaaagccagcagcgaccatttagtgcgggcctggctgcgaacctacgggtta
cctgcgctggtcacgaactgttcaaataattacggtccctgccatttcccggaaaaactg
attccgctgaccatcatcaatgcactggccggaaaaccattgccggtttacggcaacgga
cagcagattcgtgactggctctacgtcgaagatcacgcccgcgcactctatcaggtggtg
agtcagggcaaacctggcgaaacctacaatattggcggccataacgagcgtcgtaatatt
gaggtcgttgagacgatttgcagtctgcttgaagagctggcagcagaacgaaaacctgca
gggctggcgcatttccgcgatctgattacctatgtcactgaccgtccgggccacgatctg
cgctacgccattgatgccagtaaaattgcgcatgaacttggctggaagccgcaggagacc
tttgaaagcggtatgcgtaagaccgtggcgtggtatctggccaattccagctggtggcag
gctattctcgatggccgttatcagggtgaacgtctcggcttatcgcaataa
DBGET
integrated database retrieval system
