Pantoea sp. PSNIH2: PSNIH2_00115
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Entry
PSNIH2_00115 CDS
T03514
Name
(GenBank) transcriptional regulator
KO
K13631
AraC family transcriptional regulator, mar-sox-rob regulon activator
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panp03000
]
PSNIH2_00115
Transcription factors [BR:
panp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PSNIH2_00115
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AIX72331
LinkDB
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Position
complement(28366..28794)
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AA seq
142 aa
AA seq
DB search
MMHKDIIHSLTDWIDRNLDKNLSIDEVAAKAGYSKWHLQRMFRAVTRQTLGSYIRERRLT
LAAEALTLTQRPVFDIAMQYGFDSQQTFSRVFRRQFSQTPTAYRHSMRRQNALRQRPAAF
PRGDAMSSFAQRTTGVCCPVSG
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgatgcataaagatattattcattctctgactgactggattgatcggaacttagataaa
aatctttccattgatgaagtcgcagccaaagctggctactccaagtggcatctgcagcgg
atgtttcgcgccgtcaccaggcagacgctgggcagctatatccgtgaacgtcggctgacg
ctggccgcggaagcgctgaccctgacgcagcgtccggtatttgatatcgccatgcagtac
ggctttgattcacaacagactttttcccgcgttttccgccgccagttttcgcagacgccg
accgcctatcgtcacagcatgcgtcgccagaacgcgctgcgtcagcgtccggccgccttc
ccgcgcggcgatgcgatgagcagcttcgcccaacgcaccaccggcgtctgctgcccggtc
agcggttaa
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