Pantoea sp. PSNIH2: PSNIH2_00225
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Entry
PSNIH2_00225 CDS
T03514
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp00040
Pentose and glucuronate interconversions
panp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PSNIH2_00225
Enzymes [BR:
panp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
PSNIH2_00225
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
SGL
Motif
Other DBs
NCBI-ProteinID:
AIX72351
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Position
complement(53398..54564)
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AA seq
388 aa
AA seq
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MAKGNRVHLPFHHFTDEKTGAEMVRLTPPEVLCHRNYFYQKCFFNDGSKLLFAGEFDGNR
NYYLLDLQEQQATQLTEGAGDNTFGGFLSPDDRFLFYVKNERQLRCVDLQSLEERVVYTV
PEAWVGYGTWVANSDCTRLVGIEIDRQDWEPLSDWQVFKTFFEKKPHCRLLRVDLQTGEA
QTILEQRLWLGHPIYRPFDDHTVAFCHEGPHDRVDARMWLIDEDGANMRKVKDHAEGESC
THEFWVPDGSALIYVSYHKARADREICRFDPVTGHNEVLMTMPACSHLMSNQNGTLLVGD
GSGTPVDVQDTKGYTIDNDPMLWLFDVATRQHRPLAAHNSSWRVLDGDRQVTHPHPSFTP
DDKQVLFTTDYEGQPALYLATIKDNFFS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggaaaccgtgtacatttgccttttcatcactttaccgatgaaaagaccggt
gccgaaatggtgcgattaacgccgcctgaggtgttatgtcatcgcaactatttttatcag
aagtgctttttcaacgatggcagcaagctgctgttcgcgggcgagtttgacggcaaccgt
aactattacctgctcgatttacaagaacagcaggcaacgcagttgacggaaggcgcgggc
gataatacgtttggcggcttcctctcgccggacgatcgatttctgttctatgtgaaaaac
gaacgccagttgcgctgcgtcgatttgcagagtctggaagaacgcgtcgtctataccgtg
ccggaagcatgggtcggctacggcacatgggtcgccaacagcgactgcaccaggctggtc
ggcatcgaaattgaccgccaggactgggagccgctcagcgactggcaggtatttaagacc
ttctttgaaaagaaaccgcactgccgtctgctgcgggtcgatctgcaaaccggcgaggcg
cagaccatccttgaacagcgtctgtggctgggacatcccatctaccgtccgtttgacgac
cataccgtcgccttctgccacgaaggtccgcacgatcgcgtcgacgcgcgcatgtggctg
atcgatgaagacggcgccaatatgcgcaaagtcaaagatcatgccgagggtgaaagctgc
acccatgaattctgggtgccggacggatcggcgctgatctatgtctcctaccacaaggcg
cgagccgatcgcgagatctgccgcttcgatccggtcaccggccataatgaggtgctgatg
accatgccagcctgttctcacctgatgagcaaccagaacggcacgctgctggtaggcgac
ggctccggcacgccggtggatgtgcaggataccaaaggctataccatcgacaacgatccg
atgctgtggctgtttgacgtggcgacgcgccagcatcgcccgctggcggcgcataacagc
tcctggcgcgtgctggacggcgaccgtcaggtcacgcatccgcatccgtcatttacgccg
gacgacaaacaggtgctgttcaccaccgactatgaaggccagccagcgctctatctggcg
accatcaaagataactttttcagctaa
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