Pantoea sp. PSNIH2: PSNIH2_00465
Help
Entry
PSNIH2_00465 CDS
T03514
Name
(GenBank) mechanosensitive channel protein
KO
K22051
miniconductance mechanosensitive channel
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panp02000
]
PSNIH2_00465
Transporters [BR:
panp02000
]
Other transporters
Pores ion channels [TC:
1
]
PSNIH2_00465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF5347
Motif
Other DBs
NCBI-ProteinID:
AIX72393
LinkDB
All DBs
Position
complement(107563..110889)
Genome browser
AA seq
1108 aa
AA seq
DB search
MRLILSFILACVFTLPAFAASAPDAAQVRQELEQAKSAKASPAQAELVQTLESALGFINA
RNESLERAKQYQQVIDDFPKLARELRQQIASLNDSQRTLRSGMTSAELDQEILQVSSQLL
EEGRQAQQEQDRAREISDSLGQLPQQQSEARRALSESERTLHGQAVASGALTHAQNYARQ
AESAALKARVDELELAQLSANNRQELARMRAEVHQKKAEQLDDYLQALRNQLNSLRQREA
EQALARTEQLAENSGDLPAAIAEQFHVNRELSAALNQQAQRLDLIASQQRQATNQTIQVR
QALSTIREQSQWLGASNLLGEALRAQVARLPEMPKSQQLDSEMGQLRVQRLHYEDLLNQQ
QHLRQLKQENGAPLTSEQNRILDAQIKTQRELLGSLISGCDTLILEVTKLKVANSQLEDA
LGEIKEATHRYLFWTADVNPLSLSYPLEVARDLNRLLSLDTLGQLGGALMMMVTSRDTVL
PILGALLLVGFSVSSRRHYNAFLARAAGRVGKVTQDHFTLTLRTVFWSILVALPLPVLWG
ALGFGLQHAWPYPVAVAIGDGVTATLPLLWVFMISAAFARPNGLFVIHFRWPQLRVARAM
RYYSLSIGFIVPLIMLLITFANLEDRQFSATLGRLCFILICGALSLVTVSLKRAGIPLYL
DNEGSGDNVINRILWNVMICIPLAAALASCTGYLATAQALLARLETSVAIWFLLLVIYHI
IRRWMLIQRRRIAFDRARQRRADMLAHRARGEEESAAQTADGVDVEEPVIDLDAISAQSL
RLVRSILTLIALLSVIVLWSEIHSAFAFLENIKLWNASSTVQGVESLHPITLGSVLIAIL
IFFITTQLVRNMPALLELALLQHLSLTPGTGYAITTLTKYLLLLIGGLMGFSMIGIEWSK
LQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSITRINTRATTI
TDWDRKEIIVPNKAFITEQFVNWSLSDSVTRVVLTVPAPAGVDSEQVTALLRHACERCSY
VLDTPPPEVFLVDLQQGIQLFELRIHAAEMGHRMPLRHELHQLILQGFREHNIEMPFPPF
QVRMETAAKRTPASNGAPTTRTFKSGGL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatcctctcttttattctcgcctgcgtattcaccctgcccgccttcgccgcc
agcgcgcctgacgcggcgcaggttcgtcaggagctggagcaggcgaaatccgccaaagcg
tcgccagctcaggctgagttggtgcaaacgctggaatccgcgctgggctttatcaacgcc
cgcaacgagtcgctggagcgggcgaaacagtatcagcaggtgatcgatgattttcctaag
ctggcgcgcgagctgcgccagcagatcgccagcctcaacgacagccagcggacattgcgc
agcggcatgaccagcgccgagctggatcaggagatcctgcaggtcagcagtcagctgctg
gaagagggacgccaggcgcagcaggagcaggatcgcgcccgcgagatcagcgattcgctg
ggtcaactgccacagcagcagagcgaggcgcgtcgcgcgctgagcgaaagcgaacgcacg
ttacatgggcaagccgtcgcctccggcgcgctgacccatgcgcagaactacgcgcgtcag
gcggagtcggcggcgctgaaggcgcgcgttgacgagctggaactggcgcagctttctgcc
aacaaccgtcaggaactggcgcggatgcgcgccgaagtgcatcagaaaaaagcggagcag
ctggatgactatctgcaggcgctgcgcaaccagcttaacagcctgcgtcagcgcgaagcg
gagcaggcgctggcgcgcaccgagcagctggcggaaaacagcggcgatctgcccgcggcg
atcgccgaacagtttcacgtcaaccgggagctgtccgccgcgctgaaccaacaggcgcag
cgtctcgatcttatcgcctcgcagcagcgtcaggccaccaatcaaaccattcaggttcgt
caggcgctcagcaccattcgtgaacagtcgcagtggctcggcgcctccaatttgctgggc
gaggcgctgcgtgcgcaggtggcgcgcctgccggaaatgcctaagtcgcagcagctggac
agcgaaatgggccagctgcgcgtgcagcgtctgcactatgaagatctgcttaatcagcag
cagcacctgcgtcagctgaagcaggaaaacggcgcgccgctgaccagcgaacagaaccgc
attctcgacgcacagataaaaacccagcgggagctgctcggttcgctgatttccggctgc
gataccctgattctggaggtcactaagctgaaagtggccaacagccagctggaagacgcg
ctgggcgaaatcaaagaggccacgcaccgctaccttttctggaccgccgacgtcaatccg
ctgagcctgagctatccgctggaggtggcgcgcgatctgaaccggctgctgtcgctcgat
acgctgggccagctcggcggcgcgctgatgatgatggtcaccagccgcgacacggtgctg
ccgattctgggcgcacttctgctggtcggcttcagcgttagttcgcgccgtcactacaat
gcgtttctggcgcgcgccgccggacgcgtcggtaaggtgacgcaggaccatttcactctg
acgttgcgcaccgttttctggtcgattctggtcgccctgcccttgccggtgttgtggggg
gcgctcggctttgggttgcagcacgcctggccttacccggtcgcggtggcgatcggcgac
ggcgtgaccgccacgctgccgctgctctgggtgtttatgatcagcgccgccttcgcccga
cccaacgggctgtttgtgattcacttccgctggccgcagctgcgagtggcgcgcgccatg
cgctactactcgctctccatcggctttatcgtgccgctgattatgctactcatcaccttc
gccaacctggaggatcgacagttttccgctaccctgggacggctctgctttattctgatc
tgcggcgcgctgagcctggtgaccgtcagcctgaagcgcgccggcatcccgctttatctc
gataatgaaggcagcggcgacaacgtgatcaaccgcatcctgtggaatgtgatgatctgt
attcctctggcggcggcgctcgcctcctgcaccggctacctggcgaccgcgcaggcgctg
ctggcgcgtctggagacctcggtcgccatctggttcctgctgctggtgatttatcacatt
attcgccgctggatgctgatccagcgccgccgcatcgccttcgatcgcgcacgtcagcgt
cgcgccgatatgctggcgcatcgcgcgcgcggcgaagaagaatcggccgcgcagacggcg
gacggcgtggatgtcgaggagccggtgatcgatcttgacgccatcagcgcgcagtcgctg
cgcctggtgcgctcgattctgacgctgatcgccctgctctcggtgattgtgctgtggtcg
gaaattcattccgccttcgcctttctggagaatatcaagctgtggaatgccagcagtacg
gtgcagggcgtggaaagcctgcatccgattacccttggctcggtgctgatcgctatcctg
atcttctttatcaccacccagctggtgcgcaatatgcccgccctgctggagctggcgctg
ttgcagcatctcagcctgacgcccggcaccggctacgccattacgaccctgaccaaatat
ctgctgctgctgattggcggcctgatgggtttctcgatgatcggcatcgaatggtcgaaa
ctgcaatggctggtggcggcgctcggcgtggggctgggatttggtctccaggagattttc
gccaactttatctctggcctgatcattctgtttgagaagccgatccgtatcggcgatacg
gtcaccattcgcgatctgaccggcagcattacgcgcatcaatacgcgcgccaccaccatc
accgactgggatcgcaaagaaatcatcgtgccgaacaaggcgtttatcaccgagcagttc
gtgaactggtcgctctccgactccgtgacgcgcgtggtgctgaccgtgcctgcgccggct
ggcgtcgacagcgagcaggtgaccgcgctgctgcgccacgcctgcgaacgctgtagctat
gtgctggatactccgccgccggaagtgttcctggtcgatttgcagcagggcattcagctg
ttcgagctgcgcattcacgctgcggagatgggtcatcgtatgccgctgcgtcacgagctg
caccagctcattctgcaaggcttccgcgaacataatattgaaatgccgttcccgccgttc
caggtgcgtatggagaccgcggcgaaacggacgcccgccagcaacggcgcgccgaccacg
cgcacctttaagtcaggcggactttag
DBGET
integrated database retrieval system
