Pantoea sp. PSNIH2: PSNIH2_02105
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Entry
PSNIH2_02105 CDS
T03514
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSNIH2_02105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panp03019
]
PSNIH2_02105
Messenger RNA biogenesis [BR:
panp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSNIH2_02105
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AIX72683
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Position
453063..453590
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRFGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
HRKDVRLLASTRNWLRYKLPKRLVRWDTRPVCIGQKQKWFLLQLMCNDADINMQTSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFASVVMPLQESATQRNSPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgatgatggctaccgcccaaatgttggtattgtaatctgtaacaggcagggg
caggtattatgggcccggcgtttcggacagcattcctggcagttcccgcaggggggtatc
aatccaggagaaactgcggaacaggctatgtaccgtgaactctttgaagaagtcggtttg
caccgtaaagatgtccgcctgcttgcttctacccgaaactggttacgttataagttgcca
aaacgtttggtgcgttgggacacgaggccggtatgtatcggccagaaacagaagtggttt
cttctgcagttgatgtgcaatgacgccgatatcaacatgcaaaccagcagcacgccggaa
tttgacggctggcgctgggtcagcttttggtatcctgttcgtcaggtggtctcgtttaag
cgcgatgtttaccgccgcgtaatgaaagagtttgccagcgtcgtcatgccgctgcaggag
agtgcaacgcagcgcaattcgcctgcttatcgacgaaaaagaggttaa
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