Pantoea sp. PSNIH2: PSNIH2_02190
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Entry
PSNIH2_02190 CDS
T03514
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSNIH2_02190 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_02190 (recB)
Enzymes [BR:
panp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSNIH2_02190 (recB)
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSNIH2_02190 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF6259
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIX72699
LinkDB
All DBs
Position
473169..476711
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AA seq
1180 aa
AA seq
DB search
MSENNPQRLDPLTLPLQGERLIEASAGTGKTFTIGILYLRLLLGLGQRHAFHRPLSVEEI
LVVTFTEAATAELRGRIRQNIHELRLACVRGSSGNPVLTALLQEIPDPADAAALLLAAER
QMDEAAIFTIHGFCQRMLNLNAFESGMLFEQQLIEDESALRRQAAADFWRRHCYPLPLTI
ARVIAQEWTGPEQLLSTLTPWLHGESPALKYAPDGEETLAQRHEKIIARIDALKAQWRAA
APELRELIEKSGVDKRSYSSKHLPNWLDSIAVWVAEETQGYTVPKDLARFRQSVLLEKTK
KGEPPRHALFDAVDAFLAEPLSLRDLVIARALEEIRLATRREKRLRALLGFDDLLSRLDE
ALHQPGGEMLAEAIRARYPVALIDEFQDTDPQQYRIFRRLYVGQPENALLLIGDPKQAIY
AFRGADIFTYMRARGEVSAHYTLDTNWRSSPAMVASVNQLFSRLDNPFLFNQIPFIKVNA
APPNETRAFHLDGAAQPALRFWLQPGEGVGVSEYQQWMANQCAAEILHWLQAGLRGEARV
GKEGDMRPVSAADITVLVRSRNEAAVIREALNALNIPSVYLSNRDSVFTTPEARELLWLL
QAVLAPELERTLRSALATSILGLDAATIDAMSQDEDRWDALVDEFAAYRQRWQQRGVLPM
LRELMKQRHIAENLLASESGERRLTDLLHLGELLQEAAAQLDSEHALVRWLAQQVAQPNH
QAASQQLRLESDRHLVQIVTIHKSKGLEYPLVWLPFAANYREAAQGLYHDRETFQALLDL
SDDEESLALAEQERLAEDLRLLYVALTRSVYHCSIGIAPLIKGNRKKEGNSDLHKSAVGY
LIQRGEAMNASGLQEALHGLCNEAVDVATPEGTAEGRWQPEGERMPELASPAISRPLQDN
WRVTSYTGLQQHGPSVALDLTPRFDIDAAGETAEVATPALTPHTFPRGASPGTFLHGLFE
TLDFSQPPDEAWLAEQLQLAGFGDQWLPMLVDWLSRVLQTPLHQNGVSLAQLMPGQYLVE
LEFYLPMHQLLTAPALDAVMRRHDPLSARAPELNFQQVQGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEESSAYTPQAMAEAMIGHRYDLQYQLYTLALHRYLRHRVADYDYERHFGGVFY
LFLRGMDGSASENGVFHHRPSIDFVRALDSLFTGDQVESK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaacaatccgcagcggctcgatccgctaacgttgccgctccagggggagcgg
cttatcgaggcgtccgcgggaaccggcaaaacctttactatcggcatactctatctgagg
ctgttgctcggccttgggcagcgtcatgcctttcatcgaccgctttcggtagaagagatt
ctggtcgtcacctttaccgaagcggcgaccgccgagctgcgcgggcgcatacgacagaat
attcatgagctgcggctggcctgcgtgcgcggcagcagcggcaatccggtgttgacggcg
ctgttgcaagagatcccggaccccgccgacgctgcggcgctgctgctggcggctgaacgt
cagatggatgaggcggcgatcttcaccattcacggtttctgtcagcgcatgctcaatctc
aacgcctttgaatccggcatgctgtttgaacagcagctgattgaggatgagtcggcgctg
cgccgtcaggccgccgccgatttctggcgtcgccactgctatccgctgccgctgaccatt
gcgagagttatcgcgcaggagtggaccgggccggaacagctgctctcaacgctgacgccc
tggctgcatggcgagtccccggcgctgaagtatgcgcccgacggcgaagagacgctggcg
cagcgccatgagaaaatcatcgcgcgcattgacgcgctaaaggcgcagtggcgcgccgcc
gcgcctgaactgcgcgaactgattgaaaaatcgggcgtggataagcgcagctacagcagt
aagcacttacctaactggctggacagtattgcggtctgggtagcggaagaaacgcagggc
tatacggtgccgaaggacctggcgcgctttcgtcagagcgtgctgctggagaaaaccaaa
aagggcgaaccgccgcgtcatgcgctgttcgacgccgtcgacgctttcctggccgaaccg
ctgtcgctgcgcgatttggtgatcgcccgcgcgctggaagagattcgcctggcgacgcgc
cgtgagaaaaggctgcgcgcgctgctgggctttgacgatctgctcagccgtctcgacgag
gcgctgcatcagcctggcggcgagatgctcgccgaagcgatccgcgcacgctatccggtg
gcgctgatcgatgaattccaggacaccgatccgcagcagtaccgcattttccgccgtctc
tacgtagggcagccggagaacgcgctgctgctgattggcgatcccaagcaggcgatttac
gcctttcgcggcgcggatattttcacctatatgcgcgcgcgtggtgaagtcagcgctcac
tatacgctggacactaactggcgttcgtcgccagcgatggtcgccagcgttaaccagctc
ttttcccggctggataacccgtttctctttaaccaaattccctttatcaaggtgaacgct
gcgccgcccaacgaaacgcgcgcttttcatcttgatggcgctgcgcagccggcgctgcgt
ttctggctacagcctggcgaaggcgttggggtaagtgagtaccagcaatggatggcgaac
cagtgcgccgcggagatcctgcactggctacaggccggactgcgtggagaggcgcgggtg
ggcaaagagggcgatatgcgcccggtgagcgccgccgatatcaccgtgctggtgcgcagc
cgcaacgaggcggcagtaatacgcgaggcgctcaacgcgcttaatatcccttcggtttat
ctctccaaccgcgacagcgtatttactacgccggaggcgcgcgaactgctctggctgttg
caggcggtgctggcgccggaactggagcgcacgctgcgcagcgcgctggcgaccagtatt
cttggtctggacgccgccaccatcgacgccatgagccaggatgaagatcgctgggacgcg
ctggtagatgaattcgccgcctatcgtcagcgctggcagcagcgcggcgtgctgccgatg
ctgcgcgaactgatgaagcaacgccatatcgctgaaaacctgctggcgtcggagagcggc
gagcggcggctgaccgatctgttgcatcttggcgaactgttgcaggaggcggccgcccag
ctcgacagcgaacatgcactggtgcgctggctggcgcagcaggtcgcccagcccaatcat
caggccgccagccagcagctgcgtctggagagcgatcgccatctggtgcagatcgttacg
attcataaatcgaaagggctggagtatccactggtgtggctgccgtttgcggcgaactac
cgcgaggcggcgcaggggctttatcacgacagggaaacctttcaggcgctgctggatctc
agcgacgatgaggagagcctggcgctggcggagcaggagcgtctggcggaagacctgcgt
ctgctttacgtcgccctgactcgttccgtttatcattgcagcatcggcatcgcgccgctg
atcaagggcaaccgcaagaaagagggcaacagcgacctgcataaaagcgcggtcggctat
ctgatccagcgcggcgaggcgatgaacgccagcggtttgcaggaggcgctgcacggttta
tgcaacgaggcggtggacgtggcgacgccggagggaacagcggaaggacgctggcagccg
gaaggcgaacggatgccggaactggcaagcccggcgatctcccgtcccttacaggataac
tggcgcgtcaccagctacaccggcctgcaacagcacggcccgtcggtggcgctcgatctg
acgccgcgctttgatatcgacgccgctggcgagacggctgaggtcgctacgcccgcgctg
acgccgcatacctttccgcgcggcgcctcgccgggcaccttcctgcacggcctgtttgaa
acgctcgatttcagccagccgccggatgaggcgtggctggcggaacaattgcagctggcg
ggcttcggcgatcagtggctgccgatgctcgttgactggctcagccgcgtgctgcaaacg
ccgctgcatcagaacggcgtaagcctggcgcagctgatgccggggcaataccttgtggag
ctggaattttatctgccgatgcaccagttgctgaccgcaccggcgctcgatgcggtgatg
cgccgacacgatccgctgtcggcgcgcgcgccggagctgaatttccagcaggtgcagggg
atgctcaaaggctttatcgacctcgttttctgctggcagggcaaatattatctgctggat
tataagtcgaactggctgggcgaagagagcagcgcctatacgccgcaggcgatggcggag
gcgatgatcggtcaccgctacgatttgcagtatcagctttatacgctggcgctgcatcgc
tatttgcggcatcgtgtagcggactacgattacgagcgtcacttcggcggcgtgttctat
ctgtttttacgtgggatggacggcagcgccagcgaaaacggcgtgtttcatcaccgtccc
tccatcgattttgtcagggcgctggatagcctgtttaccggagaccaggtggaatcgaaa
tga
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