Pantoea sp. PSNIH2: PSNIH2_02245
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Entry
PSNIH2_02245 CDS
T03514
Name
(GenBank) transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panp03000
]
PSNIH2_02245
Transcription factors [BR:
panp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSNIH2_02245
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AIX72708
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Position
486494..487411
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYYLDIKEIFSALNDATRKLQARSAKGALTVSLLPSFAIQWLVPRLSSFNSAY
PGIDVRIQAVDREEEKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPQLLTGDKPL
KTPADLAHVTLLHDASRRDWQSYTRQLGLQHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAASEQEKFR
FRYAN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgtcttccacccttaaatgcgttgcgcgtttttgatgcggcagcgcgccat
ctcagctttacaaaagcggctgaagagctgtttgttacgcaggcagccgtaagccaccag
ataaaatctctggaagattttctgggccttaagctgtttcggcggcgtaatcgttcgtta
ttgttgaccgaagaaggtcaaagctactatctggatattaaggagattttctccgcgctc
aacgacgccacgcgcaaactgcaggcgcgcagcgccaagggcgccttgaccgtcagtctg
ctgccgagcttcgccattcagtggctggtgccgcgtctctccagctttaactcagcttat
ccgggcattgatgtgcgtatccaggcggttgaccgcgaagaggagaagctggccgacgat
gtggatgtggcgattttctacggccgcggcaactggccggggctgcgagtggaaaaactc
tacgccgaatatctgctgcccgtctgttcgccgcagctgctgactggggataagccattg
aaaacgcccgccgatctggcgcatgtgacgcttttgcatgacgcgtcgcgccgcgactgg
caatcctatacccgtcagctaggcttgcagcacatcaatgtgcagcagggtccgattttc
agccacagcgccatggttttgcaggcggcgatccatgggcagggcgtggcgttggctaac
aacgtgatggcgcaaagcgagatcgaggcgggccgcctggtctgtccttttaatgacgtg
ttagtcagtaagaacgctttttatctggtttgtcatgacagtcaggcagaactgggtaaa
atagccgcctttcgacagtggattctggcgaaagcggcaagcgagcaagagaaattccgc
ttccgctacgctaattaa
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