Pantoea sp. PSNIH2: PSNIH2_02515
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Entry
PSNIH2_02515 CDS
T03514
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSNIH2_02515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_02515
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PSNIH2_02515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AIX72759
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Position
complement(542859..545402)
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AA seq
847 aa
AA seq
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MDIGNHTPMMQQYLRLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGE
PIPMAGVPYHAVENYLARLVQLGESVAICEQIGDPALSKGPVERKVVRIVTPGTISDEAL
LNERQDNLLAAIWQDSRGFGYATLDISSGRFRITEPADREAMAAELQRTNPAELLYPEDF
AAMDLIENRRGMRRRPLWEYELDTARQQLNLQFGTRDLTGFGVENAHLALRAAGCLLQYV
KDTQRTSLPHIRSLTMERQQDSIIMDAATRRNLEITQNLAGGVDNTLAAVLDKTVTPMGS
RMLKRWLHTPVRDSRVIVQRQESIAALQDLSGELQPVLRQVGDLERILARLALRTARPRD
LARMRHAFQQLPELNAQLEGVEAGHLPALRQQMGQFDELRELLERAIIEAPPVLVRDGGV
IAPGYNAELDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNAVHGYYIQVSRGQSHL
VPMHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLLLPHLDALLQ
SAAALAELDVLTNLAERAWTLNYTRPTLSDKPGIKLTGGRHPVVEQVLKEPFIANPLALS
PQRRMLVITGPNMGGKSTYMRQTALIVLLACIGSFVPAEQATIGPVDRIFTRVGAADDLA
SGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAESLASRIKAMTL
FATHYFELTTLAEKMEGVANVHLDAVEHGDTIAFMHSVQEGAASKSYGLAVAALAGVPKE
VIKRARQKLKELEALSGSAAASNADGPQLPLLVEETSPAVEALEALDPDTLSPRQALEWI
YRLKSLL
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatattggtaaccacacgccaatgatgcagcaataccttcggctgaaggcgcagcat
cctgacatcctgctgttctaccgcatgggggatttctacgagctgttttacgatgacgcg
aaacgcgcctcgcagctgctcgatatctccctgacaaaacgcggcgcctccgccggtgaa
cccataccgatggcgggcgtgccttatcatgccgtagaaaactatctggccaggctggta
cagctgggcgagtcggtagcgatttgcgaacagatcggcgatccggccctgagtaaaggt
ccggtcgagcgcaaagtcgtacgcatcgtgacgcctggcaccatcagcgatgaagcgttg
ctgaacgagcgtcaggataacctgctggcggctatctggcaggattcgcgcggcttcggc
tacgccacgctggatatcagctccggccgcttccgcattacagagcctgccgaccgcgag
gcgatggccgctgaactgcaacgcaccaatcccgcagagctgctctatcctgaagatttc
gccgcgatggatctgattgaaaaccgtcgcggcatgcgccgccgcccgctgtgggaatat
gagctggataccgcgcgtcagcagcttaacctccagttcggcacgcgtgatttaaccggc
ttcggtgtcgaaaatgcgcatctggcgctgcgcgcggcaggctgcctgttgcagtatgta
aaagatacgcagcgcacctccctgccccatatccgctccctgaccatggaacgtcagcag
gacagcatcattatggacgccgccacccgacgtaatctggagattacgcaaaacctggcg
ggcggcgtggacaataccctggcggcggtgctggataaaaccgtcacgccgatgggcagc
cgtatgctgaaacgctggctgcatacgccggttcgtgacagccgcgtaatcgttcagcgg
caggaaagcatcgccgcgctacaggatctgagcggcgagctgcagccggtgctgcgtcag
gtgggcgatctggagcgtattcttgcgcgtctggcgctgcgcactgcacgtccgcgcgat
ctggcgcgtatgcgtcatgcttttcagcaactgccggaactgaatgcgcagctggaaggc
gtcgaggccggccatctgcccgcgctacgtcagcagatgggacagtttgacgaactgcgc
gagctgctggaacgggcgattatcgaagcgccgccggtgctggtgcgcgatggcggcgtt
atcgctcccggctataacgctgaacttgacgagtggcgcgcgctggcggacggcgcgacc
gactatcttgaccggctggaaatacgtgagcgtgaaaagctggggctggataccttgaag
gttggcttcaacgcggttcacggctattacattcaggtcagccgtggacaaagtcatctg
gtgccaatgcattacgtgcgtcgtcagacgctgaaaaacgctgaacgctacatcatcccg
gaacttaaagagtatgaggacaaagttctcacctcgaaaggcaaggcgctggcgctggaa
aaggcgctttatgacgagctgttcgatctgctgctgccgcatctggatgcgctgctgcaa
agcgccgcggcactggccgagctggacgtattgaccaacctggcggagcgcgcctggacc
ttaaactatacgcgcccgaccttaagcgacaaaccgggcattaagctcaccggcgggcgt
cacccggtggtggagcaggtgttgaaagagccgtttatcgctaacccgctggcgctttcc
ccgcagcgccgcatgctggtgattaccggcccgaacatgggcggtaaaagcacctatatg
cgacagacggcgctgattgtgctgctggcctgtatcggcagcttcgtgcccgcggagcag
gcgaccattggtccggtcgatcgcattttcacccgcgtcggcgcggcggacgatctcgcc
tccggccgttcgacctttatggtggagatgaccgaaaccgctaatatcctgcacaacgct
acagagcatagcctggtgttgatggatgaaatcgggcgcggcacctccacctatgacggc
ctttcgctcgcctgggcctgcgcggaaagtctcgccagccgtattaaagcgatgacgctg
ttcgccacgcactattttgaactgaccacgctggcggaaaaaatggaaggcgtcgccaat
gtgcatctggacgcggtagagcatggcgataccatcgcctttatgcacagcgtgcaggaa
ggcgcggccagcaaaagctacggcctggcggtggccgcgctggccggcgtgccgaaagag
gtgatcaagcgggcgcgtcagaaattgaaagagctggaagcgctgtcaggctcggcagcg
gcaagcaacgccgatggcccgcaactgccgctgctggtggaagaaacctcgccggctgtc
gaagcgctggaggcgctggaccctgatacgctttcgccgcgtcaggcgctggagtggatc
tatcgactgaaatcgctgctgtaa
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