Pantoea sp. PSNIH2: PSNIH2_02975
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Entry
PSNIH2_02975 CDS
T03514
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSNIH2_02975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_02975
Enzymes [BR:
panp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PSNIH2_02975
DNA repair and recombination proteins [BR:
panp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSNIH2_02975
Prokaryotic type
PSNIH2_02975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIX72832
LinkDB
All DBs
Position
complement(636228..636905)
Genome browser
AA seq
225 aa
AA seq
DB search
MGKTVTWHDVLATEKEQPYFVETLEMVAKERASGVTVYPPKEDVFNAFRLTELSQVKVVI
LGQDPYHGPNQAHGLAFSVRPGVAVPPSLMNMYKELESDIPGFQRPNHGFLESWAKQGVL
LLNTVLTVEAGKAHSHARFGWETFTDRVIAAINENRENVVFLLWGSHAQKKGSIIDTKRH
HVLKAPHPSPLSAHRGFFGCKHFSRTNAILSQQGETPIDWTPHLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaacggtaacctggcatgacgtattggcgacggaaaaagagcagccctatttt
gtcgaaacgctggaaatggtggctaaagagcgcgcgtcaggcgtaacggtctatccgcct
aaagaagatgtgttcaatgcgtttcgtttgaccgagctgagccaggtaaaggtggtcatt
ctgggccaggacccttatcacggccctaatcaggcgcacggactggcgttcagcgtcagg
cctggcgtagcagtaccgccttcgcttatgaatatgtataaagagctggaaagcgacatt
cccggctttcaacggccgaatcacggtttcctggagagctgggcgaaacaaggcgtgctg
ctgctgaatacggtattaaccgtagaggcgggcaaggcgcattcccatgcgcgttttggc
tgggaaacctttaccgatcgcgtgattgcggcgattaacgaaaaccgcgaaaacgtggtg
tttctgctgtggggatcgcacgcgcagaagaaaggcagcattatcgacacaaaacgacat
catgtgctgaaagcgccgcacccctctccgctttccgcgcaccggggattctttggctgc
aaacacttttcgcgcaccaacgccatccttagtcagcagggcgaaacgccgatcgactgg
acgccgcacctgccctga
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