Pantoea sp. PSNIH2: PSNIH2_04445
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Entry
PSNIH2_04445 CDS
T03514
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panp03032
]
PSNIH2_04445
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_04445
Enzymes [BR:
panp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSNIH2_04445
DNA replication proteins [BR:
panp03032
]
Prokaryotic type
DNA Topoisomerases
PSNIH2_04445
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSNIH2_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIX73094
LinkDB
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Position
961875..964511
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AA seq
878 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLEKETVDFVPNYDGTEQIPEVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIEDENISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARGEVETDAKTGRETIVIHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEVKRDAVAEVVLNNLYSLTQLQVSFGINMVALHQGQPKIMTLKEILEAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRHAPNPAEAKAGLVAQSWELGNV
AAMLERAGDNAARPEWLEEEFGIRDGRYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLAQIAELIHILESADRLMEVIRGELEAIRDQFGDQRRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYTEGTNIFMATASGTVKKTSL
TEFSRPRSAGIIAVNLREDDELIGVALTDGSNEVMLFSAAGKVVRFSEQAVRAMGRTASG
VRGIKLAEGDRVVSLIVPQEEGAILTVTQNGYGKRTANSEYPTKSRATQGVISIKVTERN
GPVIGAVQVVDSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTAADENVVGLQRVA
EPVEEEELDAIDGSVAEGEEDIAPEVETDDEIPDGEEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggttaatattgaggaagaactgaagagttcc
tatctcgattacgccatgtcggtcatcgttggccgtgcattaccagatgttcgcgatggc
ctgaagccggtccatcgtcgcgtgctttatgctatgagcgtgctggggaacgactggaac
aaaccttacaaaaaatctgcccgtgtcgttggcgacgtcatcggtaaatatcacccgcac
ggcgactccgccgtctacgacaccatcgttcgtatggcccagccgttctcgctgcgctat
atgctggtggatggccagggcaactttggttccatcgacggcgactctgccgcggcgatg
cgttacaccgaagtgcgcatggcgaaaattgcccacgagctgctggcggatctggagaaa
gagaccgtcgatttcgtgccgaactacgacggcaccgagcagattcccgaagtcctgccg
accaaaattcccaacctgctggttaacggctcgtcgggcatcgccgtcggtatggccact
aatattccgccgcataacctcaccgaggtgatcaacggctgcctggcctatatcgaagac
gaaaacatcagcgtcgaagggttgatggagcacatccccggccccgatttcccgaccgcc
gccatcatcaacgggcgccgcggcattgaagaggcctaccgtaccggacgcggtaaaatc
tacattcgcgcccgcggcgaggtggaaaccgacgctaaaaccggccgcgagactatcgtc
attcacgaaattccctatcaggtcaacaaagcgcgcctgattgagaaaatcgccgagctg
gtcaaagacaagcgtatcgaaggcatcagcgcgctgcgcgacgagtccgacaaagacggc
atgcgcatcgtaatcgaagtgaagcgcgacgcggtagcggaagtggtgctgaacaacctc
tactcgctgacgcagctgcaggtctccttcggcatcaacatggtggcgctgcatcagggc
cagccgaagatcatgaccctgaaggagattctggaagccttcgtgcgtcatcgtcgtgaa
gtagtgacgcgccgcaccatttttgaactgcgcaaagcgcgcgatcgcgcccatatcctt
gaaggtctggcgattgcgctggcgaatatcgatccgattatcgagctgattcgtcatgcg
ccgaacccggcagaagcgaaagcgggcctggtggcgcagtcctgggagctgggcaacgtc
gccgccatgctggagcgcgcgggcgacaacgccgcgcgcccggaatggctggaagaagag
ttcggcatccgcgacggccgctaccacctgaccgagcagcaggcgcaggcgatcctcgat
ctgcgtctgcaaaagctgaccggtctggaacatgaaaagctgctggatgagtacaaagag
ctgttggcgcagatcgcggagctgatccacattctggaaagcgccgatcgcctgatggaa
gtgattcgtggagagctggaagcgatccgcgaccagttcggcgaccagcgtcgcacggaa
atcaccgccaacaccgctgatatcaatatcgaagatctgatcaatcaggaagatgtggtc
gttaccctgtcgcatcagggctacgtgaagtatcagccgctttctgattatgaagcgcag
cgtcgcggcggcaaaggcaaatcagccgcgcgcatcaaggaagaggattttatcgaccgt
ctgctggtggccaacacccacgacacgatcctctgcttctccagccgcggccgtctctac
tggatgaaagtctaccagctgccggaagcgagccgtggcgcgcgcggacgtccgatcgtc
aacctgctgccgctggaagccaacgagcgtatcaccgccattctgccggtgcgtgaatat
accgaaggcaccaatatctttatggcgaccgccagcggcaccgtgaagaaaacctcgctg
accgagttcagtcgtccgcgcagtgccggcattatcgccgtcaacctgcgtgaagacgac
gagctgatcggcgtggcgctcaccgacggtagcaacgaagtgatgctgttctccgccgca
ggcaaagtggtgcgcttctccgagcaggcagtgcgcgccatgggccgtaccgcttccggc
gtgcgcggcatcaagctggcggaaggggatcgcgtggtgtcgctgatcgtgccgcaggaa
gagggcgcgattctgacggtgacgcagaacggctacggcaagcgtaccgccaacagcgag
tatccgaccaaatcgcgcgcgacgcagggcgtgatctccatcaaggtgaccgagcgcaac
gggccggttatcggcgcggtgcaggtggtggacagcgaccagatcatgatgatcaccgac
gccggtacgctggtgcgcacccgcgtatcggaagtgagcgtggtcgggcgtaacacccag
ggcgtgattctgatccgcaccgcagcggatgagaacgtggtcggtctgcaacgtgtggcg
gagccggttgaagaagaagagctggacgccatcgacggcagcgtcgcggaaggggaggag
gatatcgccccggaagtggaaaccgacgatgagatcccggacggcgaagaggagtaa
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