Pantoea sp. PSNIH2: PSNIH2_07185
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Entry
PSNIH2_07185 CDS
T03514
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp00061
Fatty acid biosynthesis
panp00071
Fatty acid degradation
panp01100
Metabolic pathways
panp01212
Fatty acid metabolism
panp02024
Quorum sensing
panp04146
Peroxisome
Module
panp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSNIH2_07185
00071 Fatty acid degradation
PSNIH2_07185
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSNIH2_07185
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSNIH2_07185
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
panp01004
]
PSNIH2_07185
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
panp04147
]
PSNIH2_07185
Enzymes [BR:
panp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSNIH2_07185
Lipid biosynthesis proteins [BR:
panp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSNIH2_07185
Exosome [BR:
panp04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSNIH2_07185
Exosomal proteins of breast cancer cells
PSNIH2_07185
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
DUF4235
Motif
Other DBs
NCBI-ProteinID:
AIX73584
LinkDB
All DBs
Position
1556034..1557746
Genome browser
AA seq
570 aa
AA seq
DB search
MANKYDFRGESLNKVWLNRYPADVPAEIDADRYTSLIDLFEQASQRYADRPAFTNMGQSM
SFRTLEQRSRAFAAYLQHKLGLSKGDRVAIMMPNLLQYPVALFGVLRAGLVVVNVNPLYT
PRELEHQLNDSGAKAIVIVSNFAHTLEKVVARTPVKHVILTRLGDQLSPAKATLVNFVVK
YIKRLVPKYNLPDAVSFRSVLQQGAQLGYIRPAIFNDDLAFLQYTGGTTGIAKGAMLTHR
NMQANLEQTKATYGSLLRDGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIP
GFVKELSRYPFTAITGVNTLFNALLNDKQFQQLDFSTLRLSAGGGMSVQKAVAERWEKLT
GHYLLEGYGLTECSPLVSVNPYDITCHNGSIGLPVPSTDIKLVDDNGLEVAEGQPGELCI
KGPQVMIGYWQRPDATEEVLKDGWLYSGDIVTVDEEGFLRIVDRKKDMILVSGFNVYPNE
IEDVVMQHPKVREAAAIGVPSDLSGEAVKICIVKKDPGLTKEELIAHCRRHLTGYKVPKI
VEFRDDLPKTNVGKILRRALRDEISKAPAA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataaatatgatttccgaggtgaatccttgaataaggtctggctgaaccgttac
cccgccgatgttccggccgagatcgatgccgatcgttatacgtcgcttatcgatctgttt
gaacaggcgtcccagcgttacgccgatcgtcccgcgtttaccaatatgggacagtcgatg
agtttccgtacgctggagcagcgtagccgggcttttgccgcgtatctccagcataagctg
ggactgagcaaaggcgatcgcgtcgccattatgatgccgaacctgctgcaatatccagtg
gcgctgttcggcgtgctgcgcgccgggttggtagtggtgaacgtcaatccgctctatacg
ccgcgcgagctggagcatcagctcaatgacagcggcgccaaagcgattgtcattgtctct
aacttcgcccacacgctggaaaaagtggtggcgaggacgccggttaaacacgttattctg
acgcgcctgggcgatcagctttcgcccgcgaaagccacgctggtcaacttcgtggtgaaa
tacatcaagcgcctggtgccgaaatataatctgccggatgcggtctctttccgcagcgta
ttgcagcagggcgcacagctgggctatatcagacccgctatcttcaacgacgatctcgcc
tttttgcagtacaccggcggcactaccggcatcgccaaaggggcaatgctgacgcaccgc
aatatgcaggccaatctcgaacagactaaagccacctatggttcgctgctgcgcgacggc
aaagagctggtggtgacggctttgccgctctatcacatcttcgcgctgaccgtgaactgc
ctgctgtttatcgaactgggcggccagaatctgctgatcaccaatccgcgcgatattccc
ggctttgtaaaagagctaagcagatatccttttaccgcgattaccggcgtcaacacgctg
tttaatgcgctgctgaatgacaaacagttccagcaactcgatttttctacgctgcgcctg
tctgccggtggcggcatgtcggtacagaaggcggtagcggagcgctgggaaaagctgacc
ggccactatctgctggaaggttacggcctgaccgagtgctcgccgctggtgtcggtcaat
ccttacgatattacctgtcataacggcagcatcggcctgccggtaccctcgaccgatatt
aagctggtggatgataacggccttgaagtggcagaagggcagccgggcgagctttgcatc
aaaggcccgcaggtgatgatcggttactggcagcggcctgatgccaccgaagaagtgctg
aaagatggctggctctacagcggcgatatcgtgaccgtcgatgaagagggctttttacgc
atcgtcgatcgtaaaaaggatatgattctggtctccggcttcaatgtctaccccaatgaa
atcgaggatgtggtgatgcagcatccgaaagtgcgcgaagcggcggcgatcggcgtgccc
agcgacctctccggtgaagcggttaaaatctgcatcgtgaaaaaagatcctgggctgacc
aaagaggagctgatcgctcactgccgtcgtcacctgaccggctacaaggtgccgaagatt
gtcgaattccgtgacgacctgccgaaaaccaacgttggcaaaattctgcgccgcgcgttg
cgcgacgagataagcaaagcgcctgccgcctga
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