Pantoea sp. PSNIH2: PSNIH2_07405
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Entry
PSNIH2_07405 CDS
T03514
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
panp03036
]
PSNIH2_07405
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_07405
Chromosome and associated proteins [BR:
panp03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
PSNIH2_07405
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSNIH2_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6626
PaaX_C
TetR_C_24
DUF6280
GrpE
BST2
Motif
Other DBs
NCBI-ProteinID:
AIX73622
LinkDB
All DBs
Position
complement(1600092..1600499)
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AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVIVNERREEESQAQAEIEERTRKLQQ
YREMLIADGIDPNELLQTMAATKTSGKAKRAARPAKYKYVDENGETKTWTGQGRTPAVIK
KAIEEEGKQLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattctgaacaacatccgtacactgcgcgcccaggccagagaa
tgtactctggaaactctggaagaaatgctggaaaagctggaagtgatcgttaacgaacgc
cgtgaagaagaaagccaggcgcaggctgaaattgaagagcgtacgcgtaaacttcaacag
taccgtgaaatgctgatcgctgacggtattgacccgaatgaactgctgcagacgatggct
gcgacgaaaaccagcggcaaagctaaacgcgctgcacgtccggctaaatataagtacgtt
gatgaaaatggcgaaacgaaaacctggaccggccagggccgcacgcctgcggtaatcaag
aaagccattgaagaggaaggcaaacagctggacgattttctgctgtaa
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