Pantoea sp. PSNIH2: PSNIH2_07655
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Entry
PSNIH2_07655 CDS
T03514
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
panp03016
]
PSNIH2_07655
Enzymes [BR:
panp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PSNIH2_07655
Transfer RNA biogenesis [BR:
panp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PSNIH2_07655
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AIX73670
LinkDB
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Position
complement(1655018..1656949)
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AA seq
643 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRVEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMAGDRV
IAALQTDKDREIAEPETLVEPFLTRFVGRVQKKDDRLSIVPDHPLIKDNIPCRPVRSLQH
DFQAGDWAVAEMRRHPLKGDRGFYAELTEFITTGDDHLAPWWVTLSRHNLEREAPAVEFS
EMLDEQLAREDLTALDFVTIDSASTEDMDDALYVEELADNALRLTIAIADPTAWVPADSK
LDAMAAERAFTNYLPGFNIPMLPRELSDNVCSLRPNERRPALACRVTVAQDGALSDVQFF
AAWIESKAKLVYDEVSDWLENSGEWQPQSEAIAQQIRLLHRLCQARVQWRQQHALVFKDR
PDYRFLLGEKGEVLDIIAEPRRIANRIVEEAMIAANICAAMVLREKLGFGIYNVHLGFDL
ANAEQAAAVLANHGVTADAAAMATLEGFRELRRQLDAQPTQFLDSRIRRFQSFAEISTEP
GPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIRGESAQRPTEEVTLKMGERRRLNRMA
ERDVSDWLYARFLQKAAGSDTRFSAEIIDVSRGGMRVRLLDNGAVAFIPAPFIHAVRDEL
VCSQENGTVQVKGEVVYRVTDVIEVTIAEVRMETRSIVARPAA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataatccgctgcttgcgcagctcaaagagaagctccatgcccagacgccg
cgtgtcgaaggggtggtaaaaggcaccgaaaaaggtttcggtttcttagaagtcgatgcg
cagaaaagctactttattccgccgccgcagatgaaaaaagtgatggcgggcgaccgcgtt
atcgctgcgttgcaaaccgataaagaccgcgaaatcgccgagccggagacgctggttgag
ccattcctgacgcgctttgttggccgggtgcagaaaaaagatgaccgcctttctatcgtt
cccgatcatccgctgattaaagacaacattccctgccgtcctgtgcgtagcctgcaacat
gattttcaggcaggcgactgggccgtggcggaaatgcgtcgccatccgttaaaaggcgat
cgtggattttacgcggagcttaccgaatttatcaccaccggcgacgatcatctggcgccg
tggtgggtgacactgtcacgtcacaatctggagcgcgaagccccagcggttgaattcagc
gagatgctggacgagcaactggcacgcgaagatctcaccgcgctcgatttcgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctctatgtcgaagaactggcggacaac
gcgctgcgtctgaccatcgccattgccgatccgaccgcctgggtgccggccgacagcaag
ctggacgccatggccgccgagcgcgcgttcaccaactatctgccgggctttaatatcccg
atgctgccgcgcgaactttctgacaacgtctgctcactgcgtcccaacgaacgccgcccg
gcgctcgcctgtcgcgttaccgtggcgcaggacggcgcgctctccgacgtgcaatttttc
gccgcctggatcgaatcgaaagccaagctggtttacgacgaggtttccgactggctggag
aacagcggcgaatggcagccgcagagtgaagcgatcgcgcagcagatccgtttactgcat
cgtctctgccaggcgcgcgtccaatggcgccagcagcatgcgctggtgtttaaagatcgc
cccgactaccgcttcctgctgggtgaaaaaggcgaagtgctggacattatcgccgagccg
cgccgcatcgccaaccgcattgtggaagaagcgatgatcgccgccaacatctgcgccgcg
atggtgctgcgcgagaagcttggcttcggcatctataacgttcacctgggcttcgatctt
gcaaatgccgaacaggcggcggccgtgctggcgaaccacggcgtgaccgccgacgccgcc
gcgatggcgacgctggaaggtttccgcgagctgcgtcgccagctggacgcgcagccgacc
cagttcctcgacagccgtatccgccgcttccagtcgtttgcggaaatcagcaccgagcct
ggcccgcatttcggcctcggccttgaagcatacgccacctggacttccccgatccgtaag
tatggcgatatggtcaaccatcgtctgctgaaagcgattatccgtggtgaaagcgcccag
cgcccaaccgaagaggtgacgctgaagatgggcgagcgtcgtcgtctgaaccgtatggct
gaacgcgacgttagcgactggctctacgcgcgcttcctgcaaaaagcggcgggcagcgat
acccgtttcagcgccgagatcattgacgtttcccgcggcggcatgcgcgtgcgcctgctg
gataacggtgccgtcgcctttattccggccccgttcattcacgccgtgcgcgatgagctg
gtatgcagccaggaaaacggtacggtacaggtaaaaggcgaagtggtgtatcgcgtgacc
gacgtgattgaggtgaccatcgccgaagtacggatggaaactcgcagcatcgtcgcacgt
ccggcagcctaa
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