Pantoea sp. PSNIH2: PSNIH2_10705
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Entry
PSNIH2_10705 CDS
T03514
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panp03000
]
PSNIH2_10705
Transcription factors [BR:
panp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PSNIH2_10705
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
AIX74199
LinkDB
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Position
complement(2310092..2310730)
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AA seq
212 aa
AA seq
DB search
MENKTPTRRARAVAAKRSAILDAALEYFSQFGMHGTSLNKVAERAGVSKTNLLYYFPSKE
ALYIAVLKEILDVWLAPLRALREDQDPLAAIRHYIQLKLEVSRDHPQASRLFCLEMLQGA
PLLKAELEGDLKALIDEKSRVIENWIVQKRLAPVEPQHLIFMLWATTQHYADFSAQVEAI
TGRTLNDEEFFQQAVANVQHMVIEGIRIRPAP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagacacccacgcggcgcgcgcgggcggtggcggcgaagcgctcggcgatc
cttgacgccgcgcttgagtacttttcacagttcggcatgcacggtaccagcctaaataaa
gtggccgagcgcgctggcgtctcgaaaaccaacctgctctactattttccctcgaaagag
gcgctctatatcgccgtgctgaaagagattctggatgtctggctggcgccgctgcgcgcg
ctgcgtgaagatcaggacccgctggcggcgattcgtcactatattcagctcaagctggag
gtatcgcgtgaccatcctcaggcctcccgacttttctgtctggagatgctgcagggcgcg
ccgctgttaaaggcagagctggaaggcgatctcaaggcactgattgacgaaaagtcgcgc
gtcattgaaaactggatcgtgcagaagcgtttggcgccggtagagccgcagcatctgatt
tttatgctctgggcgacgacgcagcactacgcggatttctccgcgcaggttgaggcgatt
accggacgcaccctgaacgatgaggaatttttccagcaggcagtcgccaatgtgcagcat
atggtgattgaaggcattcgtatccgcccggcgccttaa
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