Pantoea sp. PSNIH2: PSNIH2_12670
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Entry
PSNIH2_12670 CDS
T03514
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panp03032
]
PSNIH2_12670
03036 Chromosome and associated proteins [BR:
panp03036
]
PSNIH2_12670
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_12670
DNA replication proteins [BR:
panp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSNIH2_12670
Chromosome and associated proteins [BR:
panp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PSNIH2_12670
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PSNIH2_12670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AIX74540
LinkDB
All DBs
Position
complement(2735383..2735655)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAFIGSVSDSLKSGEEVALVGFGTFSVRERSERTG
RNPQTGKEITIPASKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaattgatcgacaagattgccgcagacgctgatatttctaaagcggca
gctggacgtgttttagatgcttttattggttctgtttctgattctctgaaatcaggcgag
gaagtagcactggttggctttggcaccttctcggtacgcgagcgctctgagcgcaccggc
cgtaaccctcagacaggtaaagaaattaccattccggcaagtaaagtaccgggcttccgt
gccggtaaagcgctgaaagacgcggtgaactga
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