Pantoea sp. PSNIH2: PSNIH2_13950
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Entry
PSNIH2_13950 CDS
T03514
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03030
DNA replication
panp03430
Mismatch repair
panp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSNIH2_13950 (dnaE)
03430 Mismatch repair
PSNIH2_13950 (dnaE)
03440 Homologous recombination
PSNIH2_13950 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panp03032
]
PSNIH2_13950 (dnaE)
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_13950 (dnaE)
Enzymes [BR:
panp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSNIH2_13950 (dnaE)
DNA replication proteins [BR:
panp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSNIH2_13950 (dnaE)
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSNIH2_13950 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIX74762
LinkDB
All DBs
Position
complement(2991426..2994908)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRIHSDYSMVDGLAKTGPLVKKAAALGMPAMAITDFTNLCGLVKFYGTAHGA
GIKPIIGADFLVASELMGDELTQITVLAMNNTGYQNLTLLISRAYQRGYGVNGPTIDRDW
LAEFSEGLLLLSGGRRGDVGRSLLRGNQALVAQCLAFYQEHFPDRYYLELIRTGRPDEES
YLHAAVELAIAEGVPVVATNEVCFINEEDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSAEEMCELFSDIPEALENSVEIARRCNVTVRLGEYFLPKFPTGEMTTEDFLVMRSREGL
EERLAFLFPDPEVRAQKRPEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALDMINARRAKQGEAPIDIAAIPLDDKKSFDML
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFKEGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYQFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKDGYFRELFDLCARTDPKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEQSYASITPWPEQVRLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKITTAAGLVVAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGAAWRVSPCD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttattcatctgcgtatccacagcgattattcgatggtcgacgga
ctggcgaagaccggcccgctggtgaagaaagcggccgcgctcggtatgccggcgatggcg
atcacggatttcaccaacctgtgcggactggtgaagttttacggtacggcgcacggcgct
ggcattaagccgattatcggcgccgattttctcgtcgccagcgagctgatgggcgacgag
ctgacacaaatcaccgtactggcgatgaacaatactggctaccagaatttgacgctgctg
atttcacgcgcctaccagcgcggctacggcgttaacgggccaacgatcgatcgcgactgg
ctggcggaattcagcgaagggctgcttctgctctctggcggacgccgcggagacgtgggc
cgcagcctgcttcgcggcaatcaggcgctggtggcgcagtgtctcgccttctatcaggaa
cactttcccgatcgctattatctggagctgatccgcaccgggcgtcctgatgaggaaagc
tatctgcatgccgccgtcgagctggcaattgcggaaggcgttccggtcgtggcgaccaat
gaagtctgttttattaatgaagaggatttcgacgcgcatgagattcgcgtcgcgattcat
gacggctatacgctggacgatcctaaacgcccgcgcaactacagtccgcagcaatatatg
cgcagcgcggaggagatgtgcgaactcttctccgacatcccggaagcgctggaaaacagc
gtagagatcgcccgtcgctgtaacgtcacggtacggcttggcgaatatttcctgccgaaa
ttccccaccggcgagatgaccaccgaagactttctggtgatgcgttcgcgcgaggggttg
gaggagcgtctggcgttcctgttccccgatcctgaggttcgggcgcagaagcggccggaa
tatgacgaacgtctggagatcgagcttaacgttatcaaccagatgggtttccccggctac
ttcctgattgtcatggagtttatccagtggtcgaaagataacggcattccggtcggaccg
ggacgcggttcgggcgccggctcgctggtggcctatgcgctgaagatcaccgacctcgat
ccgctggaattcgacctgctgttcgaacgcttcctgaacccggagcgcgtctccatgccc
gacttcgacgtcgatttctgcatggaaaaacgcgatcaggtgattgaacacgttgccgat
atgtacgggcgcgacgcggtatcgcagatcatcaccttcggcaccatggcggcgaaagcg
gttatccgtgacgtgggccgcgtgctgggccatccttacggtttcgtcgatcgcatctcg
aagctggtgccgcccgatccgggtatgacgctggaaaaagcgttcgccgccgagccgcag
ctgccggaaatctatgaggccgatgaagaggtcagggcgctgatcgatatggcgcgcaag
ctggaaggggtgacgcgcaacgccggcaagcacgccgggggcgtcgtgatcgcgccgacc
aaaatcaccgacttcgcgccgctctactgcgatgaaaacggcaaccacccggttacccag
tttgataaaaacgacgtggaatacgccggtctggtgaagttcgacttcctcggcctgcgc
accctgaccatcatcaactgggcgctggatatgattaatgcgcgccgggcgaagcagggc
gaggcgccgatcgatatcgccgcgattccgctggatgataaaaaaagctttgatatgctg
cagcgcgcggaaaccacagcggtttttcagcttgaatcgcgcggcatgaaagacttgatt
aagcgtctgaagccggactgcttcgaagatatgatcgcactggtggcgctgttccgtccc
ggcccgttgcagtcgggaatggtggataactttatcgaccgtaagcacgggcgcgaagcg
atctcctaccccgatattcagtggcagcatgagtcgctgaagccggtgctggaaccgacc
tacggcatcattctctaccaggaacaggtgatgcagatcgcccaggtactggcgggctat
acgctcggcggcgcggatatgctgcgtcgcgccatgggtaagaagaagccggaggagatg
gccaagcagcgctcggtgtttaaagagggcgcggagagcatgggcatcgacggcgagctg
tcgatgaaaatcttcgatctggtggaaaaattcgccggttacggcttcaataaatcacac
tccgccgcctatgcgctggtttcttaccagacgctgtggctgaaggcgcactatccggcc
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaagtggtcggcctg
gtggatgagtgctggcgcatggggctgaaagtgctgccgccggatatcaactccggcctc
tatcagttccacgtcaacgatgacggcgagatcgtatacggcatcggcgccattaaaggc
gtcggtgaaggtccgatcgaagcgatcattgaggcgcgaaataaagatggctacttccgc
gagctgttcgatctctgcgcgcgcaccgatccgaagaaaatcaaccgccgcgtgatggaa
aaactgatcatgtcgggcgccttcgatcgtctggggccgcatcgcgcggcgctgatgagc
gcgctgggcgatgcgctgaaggcggcggatcagcacgccaaagcggaggcgatcgggcag
gcggatatgttcggcgtactggcggaggagccggagcaggtagagcaatcctatgccagc
atcacgccgtggccggagcaggtgcggctggacggcgagcgggagacgctggggctttat
ctgaccggccatcccatcaaccagtatctgaaagagattgaacgctacgtcggcggcgtg
cgtttgaaagacatgcatccgaccgatcgcggtaaaatcactaccgcggccggtttggtg
gtggcggcccgcgttatggtcactaaacgcggcaaccgtattggcatctgcacgctggat
gatcgttccggtcgtctggaggtgatgttgttcacagatgcgcttgataaataccagcag
ctgctggaaaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagc
gggggccttaaaatgaccgcccgtgaagtgatggatatcgacgaagcacgtgaaaaatat
gcgcgtggacttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcagtctctggaaccccatcgttcggggacaattccggtacatctctactatcag
agagcggatgcgcgggccagactgcgttttggcgcagcatggcgcgtatctccctgcgat
cgtttgctgaatgacctgcgatcgctgataggatcggagcaggtggaactggagtttgac
taa
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