Pantoea sp. PSNIH2: PSNIH2_14830
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Entry
PSNIH2_14830 CDS
T03514
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
panp
Pantoea sp. PSNIH2
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_14830
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSNIH2_14830
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
RecA
GvpD_P-loop
AAA_22
Rad51
AAA_14
ABC_tran
SLFN-g3_helicase
AAA_24
AAA
Viral_helicase1
DUF7125
Zeta_toxin
NTPase_1
cobW
AAA_16
Zn_ribbon_Thio2
nSTAND3
AAA_29
PAXNEB
DZR
Motif
Other DBs
NCBI-ProteinID:
AIX74929
LinkDB
All DBs
Position
complement(3208138..3209520)
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AA seq
460 aa
AA seq
DB search
MAKAVKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPAAARNERLSGYAGTAGA
SRVQKLSEISLEALPRFSTGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTLCKLS
VDMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEQEQPKLMVIDSIQ
VMHMAEILSSPGSVAQVRETAAYLTRFAKTRGVAIIMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGMREVSNPSAIFLSRGDEVTAGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALMLAMVSSLRDRPLPQDLVIFGEVGLAGEIRPVPSGQERISEAA
KHGFQRAIVPAANAPKKVPANMKVYPVKKLADALAILDEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaagcggtaaaacgtgccttcgtctgcaatgaatgtggcgcagactatccgcgt
tggcaggggcaatgcagcgcctgccacgcctggaacactatcaccgaagtgaggcttgcg
gcctcgcctgcggcggcgcgcaatgagcgtctttccggctatgccggcaccgctggcgcc
agccgcgtgcagaagctgtcggaaatcagtctggaggcgctgccgcgcttctccaccggc
tttaaagagttcgaccgcgtgctgggcggcggcgtggtgccgggcagcgctattctgatc
ggcggcagtccgggcgccggtaaaagtaccctgctgctgcaaaccctctgtaagctgtcg
gtggatatgaaaacgctttacgtcaccggcgaagagtcgttacagcaggtggcgatgcgc
gcgcatcgcctcggcctgccgaccgataacctgaatatgctgtcggaaaccagcatcgag
cagatctgcctgatcgccgagcaggagcagccgaagctgatggtgatcgactccattcag
gtcatgcatatggcggagattctgtcttcgccaggcagcgtagcgcaggtgcgtgaaacc
gccgcttatctgacgcgcttcgccaagacgcgcggcgtggcgattattatggtcggccac
gtcaccaaagatggctcgctggccggtccgaaagtgctggagcactgtattgactgctcc
gtgctgctggacggcgacgccgattcccgtttccgcacgctgcgcagccataaaaaccgc
ttcggcgcggtgaatgagctgggcgtattcgccatgaccgagcaggggatgcgcgaagtc
agcaacccgtcggccatcttcctgtcgcgcggcgacgaggtgactgccggcagctcggta
atggtggtctgggaaggcacccggccgctgctggtggagattcaggcgctggtggaccac
tcgatgatggccaacccgcgccgcgtcgcggtcgggctggagcagaatcgtctggcgatt
ctgctggcggtgctgcatcgtcacggcggcctgcaaatggcggatcaggatgtgttcgtc
aacgtggtgggcggggtgaaggtcaccgaaaccagcgccgacctggcgctgatgctggcg
atggtctccagtctgcgcgatcgaccgctgccgcaggatttggttatttttggcgaagtc
gggctggcaggcgagatccgcccggtgccgagcggacaggagcgtatctctgaagcggcc
aagcatggcttccaacgcgcgatcgttcctgcggctaatgcgccgaagaaagtgccagcg
aatatgaaggtttacccggtgaaaaagctggctgacgcgctggcgattctggatgagtta
taa
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