Pantoea sp. PSNIH2: PSNIH2_16470
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Entry
PSNIH2_16470 CDS
T03514
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03420
Nucleotide excision repair
panp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSNIH2_16470 (uvrD)
03430 Mismatch repair
PSNIH2_16470 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_16470 (uvrD)
Enzymes [BR:
panp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSNIH2_16470 (uvrD)
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSNIH2_16470 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSNIH2_16470 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
PhoH
AAA_22
DUF6658
Motif
Other DBs
NCBI-ProteinID:
AIX75206
LinkDB
All DBs
Position
complement(3555310..3557472)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLNSLNDKQREAVAAPRTNLLVLAGAGSGKTRVLVHRIAWLLTVENCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDARLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDEGLRPHHIESYGNPVEQTWLRVYQAYQEA
CDRAGLVDFAELLLRAHELWLTKPHILNHYRERFTNIMVDEFQDTNNIQYAWIRLLAGDS
SRVMIVGDDDQSIYGWRGAQVENIQRFLQDFRGAETIRLEQNYRSTNNILKAANALIANN
NGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKVWQENGGALNDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQTSRELLQEKALAGRAAAALQRFTELVDSLAQETAELPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQTRIENLEELVNATRQYSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTMHAAKGLEFSQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMKKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVDEVRLRASISRPVNHQRMG
TPVAQNDSGFTLGQRVRHAKFGEGTIINLEGSGDHSRLQVAFQGQGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctaaacagcctgaatgataaacagcgcgaggccgttgcggcg
ccgcgcaccaacctgctggtgctggcgggcgcgggcagtggcaagacacgcgtgctggtg
caccgcatcgcctggctgctgacggtagagaactgctcgccctattcaattatggcggtg
acctttaccaacaaggccgcagcggaaatgcgtcaccgtattgagcagctgatcggcacc
agccagggcggcatgtggatcggcaccttccatggtctggcgcaccgcctgctgcgcgcg
caccatcttgacgcccgtctgccgcaggatttccagatcctcgacagcgaggaccagctg
cgcctgctgaagcgcctgatcaaggcgatgaacctggatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgaagggctgcgcccacatcatatcgag
agctacggcaatccggtggagcaaacctggctgcgcgtttatcaggcctatcaggaggcg
tgcgatcgcgccgggctggtcgactttgccgagctgctgctgcgcgcccatgagctgtgg
cttactaagccgcatattctcaatcactatcgcgaacgcttcaccaacatcatggtggac
gagttccaggacaccaacaatattcagtacgcctggattcgtctgctggcgggcgacagc
agtcgagtgatgatcgtcggcgacgatgaccagtctatctacggctggcgcggcgcgcag
gtggagaatatccagcgtttcctgcaggattttcgcggcgcagaaaccattcgacttgag
cagaactatcgctccaccaacaatattctgaaagcggccaacgccctgatcgccaacaac
aacggtcgtctcggcaaagagctgtggaccgacggcagcgacggcgagccgatttcgctc
tactgcgcgtttaacgagctggatgaagcgcgctttgtggttaaccgcatcaaggtctgg
caggagaacggcggggcgctcaacgactgcgccattctctatcgcagcaacgcccagtcg
cgcgtgttggaggaggcgttattacaggccagtatgccgtaccgcatttatggcggcatg
cgcttcttcgaacgccaggagatcaaagatgcgctggcctatctgcgtctgatcgccaac
cgcaacgacgacgccgcctttgagcgcgtggtcaatacgccgacgcgcggcatcggcgac
cgcacgctggacgtggtgcgtcaggcatcgcgcgatcgtcagctgacgctgtggcaaacc
agccgcgagcttttgcaggaaaaagcgctggccggacgcgccgccgctgcgctgcaacgc
ttcaccgaactggtggattcgctggcgcaggagaccgccgaactgccgctgcacgtccag
actgaccgggtgattaaagattccggcctgtggctgatgtatgagcaggaaaaaggcgaa
aaaggccagacgcgcatcgaaaacttagaggaactggtaaacgccacgcgtcagtacagc
taccaggatgaagatgaagatttgatgcccttacaggcgttcctgtcgcatgcggcactg
gaggccggggaaggccaggcggacaaatggcaggacgcggtgcagctgatgaccatgcat
gcggcgaaagggctggagttcagtcaggtatttatcgttggtatggaagaggggatgttc
cccagtcagatggcgctggatgagggcggcaggctggaagaggagcgccgtctcgcctac
gttggcgtcacccgcgcgatgaaaaagctgacgctgacctatgcggaaacgcgtcggctg
tacggcaaagaggtttatcatcgcccgtcgcgctttatcggcgagctgccggaagagtgc
gtcgatgaggtgcgcctgcgcgccagtattagcaggccggtcaatcatcagcgcatgggc
acgccggtggcgcaaaacgacagcggctttacgctgggtcagcgcgtacgtcacgccaaa
ttcggcgaaggcaccatcatcaatctcgaaggcagcggcgatcacagtcgtttgcaggtg
gcgtttcagggacagggcattaaatggctggtggccgcctacgctcgtctcgaagcggta
tag
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