Pantoea sp. PSNIH2: PSNIH2_16490
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Entry
PSNIH2_16490 CDS
T03514
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp00300
Lysine biosynthesis
panp00470
D-Amino acid metabolism
panp01100
Metabolic pathways
panp01110
Biosynthesis of secondary metabolites
panp01120
Microbial metabolism in diverse environments
panp01230
Biosynthesis of amino acids
Module
panp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSNIH2_16490 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSNIH2_16490 (dapF)
Enzymes [BR:
panp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSNIH2_16490 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AIX75966
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Position
complement(3559846..3560670)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKSDIRVSTQTGRMVLSVTNDELVRVNMGE
PNFEPQQVPFRANKAESLYLLRVAEQTIMFGVVSMGNPHCVIQVANVKTAAVETLGPVLE
SHERFPERVNVGFMEVVNSDHIRLRVYERGAGETQACGSGACAAVACGIQQGLLAEKVRV
DLPGGTLHIAWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcacggtcttggcaatgactttatggtcgttgacgccgtcacg
caaaatgtctatttctcgccggagttgatccgtcgcctggcggatcgtcatctgggcatc
ggcttcgatcagctgttgatcgtcgagccgccttacgatcccgatctcgatttccattac
cgcatctttaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcacgctgtttc
gcccgctttgtccgcctgaagggattgacgaacaaaagcgatatccgcgtcagcacccag
acggggcgcatggtactcagcgtcaccaacgatgagctggtgcgcgtcaacatgggcgag
ccaaatttcgaaccgcagcaggtgccgtttcgcgccaacaaggcggaaagcctttatctg
ctgcgcgtcgccgagcaaaccatcatgttcggcgtggtctccatgggcaatccgcattgc
gtgattcaggtcgccaacgtaaaaaccgcggcggtcgaaacgctgggcccggtgctggaa
agccatgaacgtttcccggagcgggttaacgtcggttttatggaagtggtgaattcggat
catatccgtctgcgcgtttatgaacgcggcgcaggcgaaacgcaggcctgcggcagcgga
gcgtgcgctgcggtggcctgcggcattcagcaagggctgttggcggaaaaagtgcgcgtc
gatctgccgggcggtacgctgcatatcgcatggaaagggccgggacatccgctctatatg
accggaccggccacgcacgtttatgatgggtttattcatttatga
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