Pantoea sp. PSNIH2: PSNIH2_16845
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Entry
PSNIH2_16845 CDS
T03514
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
panp
Pantoea sp. PSNIH2
Pathway
panp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSNIH2_16845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panp03400
]
PSNIH2_16845
Enzymes [BR:
panp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSNIH2_16845
DNA repair and recombination proteins [BR:
panp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSNIH2_16845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_22
AAA_30
TrwB_AAD_bind
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AIX75263
LinkDB
All DBs
Position
3634265..3636460
Genome browser
AA seq
731 aa
AA seq
DB search
MPVAQVALPVPLARRFDYLLPAHLRPVVGGRVRVPFGNRKAIGVVVGFSEQSDLPEAQLK
NVLEVIDDESLFPPSLWRILHWAADYYHYPLGEVLFHALPVLLRQGKPAQEAPLWQWFIT
ELGRETAPESLKRAPKQQQALAILRQQPLYRHEIAQHDLADQALQALRAKGLCDLREHLP
AREDWRASFSINGERLRLNTEQAMAVGAIRSEDEEFAPWLLAGITGSGKTEVYLSVLENV
LSRGRQALVLVPEIGLTPQTIARFRARFNAPIDVLHSGLNDSERMAVWLRARQGENAIVI
GTRSALFTPFARPGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREENIPIVMGSATPAL
ETLHNVQSGKYRQLNLSKRAGNARQATQQLIDLKGVQLQGGLSPALIQRMRQHLQADNQV
LLFLNRRGFSPALLCHDCGWIAECQRCDHYYTLHQQQRQLRCHHCDSQRPVPRQCPQCGS
THLVPVGLGTEQLEHNLQTLFPGVPLSRIDRDTTSRKGALEQHLADVFRGGARILIGTQM
LAKGHHFPDVTLVSLLDVDGALFSADFRAAERFAQLYIQVAGRAGRAGKQGEVLLQTHHP
EHPLLQILLHQGYDAFAAQTLSERRSVQLPPFTSHALFRAEDHDNQQAAAFLHQLRNLLE
ASPLRDEALWIMGPVPALQAKRGGRYRWQLLLQHPARLRLQQLLKTTMPLISTLPLSRKV
KWTLDVDPTES
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgctcaggtcgcgctgcccgttccgctcgcacgccggttcgattatctgctc
cccgcccatttgcgccccgttgtcggcgggcgcgtgcgcgtgcctttcggcaaccgcaag
gcgatcggcgtcgttgtgggattcagcgagcaaagcgatctgccggaagcccagctgaaa
aacgtgctggaagtcatcgacgacgaatccctgtttcccccgtctctctggcgcatcctg
cactgggccgctgattactatcactatccgctgggcgaagtgctttttcacgccctgccg
gtgctgctgcgtcagggaaagccggcgcaggaagcgccgctctggcaatggtttattacc
gaactggggcgcgaaaccgcgccggaaagcctgaagcgcgcgccgaaacagcagcaggcg
ctggcgattctgcgccagcagccgctttatcgacacgagatcgcgcagcatgatctggcc
gatcaggcgctgcaggcattacgggcgaaagggctttgcgatctgcgcgagcatctgccc
gcacgtgaagactggcgcgccagctttagcatcaacggcgagcggctgcggctgaatacc
gaacaggcgatggcggtcggcgctatccgcagcgaggatgaggagttcgcgccctggctg
ctggcgggcattaccggttccggcaaaacggaagtttatctcagcgtactggaaaatgtg
ctgagccgcggccgacaggcgctggtgctggtgccggaaatcgggctgacgccgcaaact
atcgcgcgtttccgcgcgcgcttcaatgcgcccatcgacgtgctgcattccggcctcaac
gacagcgaacgcatggccgtctggctgcgcgcgcgtcagggagaaaacgccatcgtcatc
ggcacccgatccgcgctgtttacgccctttgcccgtccaggcgtcattattatcgatgaa
gaacacgacagctcttataaacagcaggaaggctggcgctaccatgcgcgcgatctcgcc
gtattccgcgcgcgcgaagaaaatattcccatcgtgatgggttcagccacgcctgcgctg
gaaacgctgcataacgtacagagcggcaagtatcgtcagctcaacctgagcaaacgcgcc
ggcaacgctcgccaggcgacgcagcagctgatcgatctcaaaggcgttcagctgcagggc
ggtctttctccggcgctgatccagcgcatgcgtcagcatctgcaggcggataaccaggtg
ctgctgtttcttaaccgccgcggcttttcgcccgcgctgctgtgccacgactgtggctgg
atagccgaatgccagcgctgcgatcactactacacgctgcatcagcaacagcgccagcta
cgctgccaccactgcgacagccagcggccggtgccgcgccagtgcccgcagtgcggctcc
acgcatctggtgccggtgggattaggcaccgagcagctggagcataatctgcaaacgctg
tttcccggcgtgccgctgtcgcgcatcgaccgcgacaccaccagccgcaaaggcgcgctg
gagcagcatctggccgacgtgtttcgcggcggcgcgcgtattctgatcggcacgcaaatg
ctggcgaagggccatcattttcctgatgtgacgctggtgtcgctgctggatgtggacggc
gcgctgttctccgctgactttcgcgccgccgaacgttttgcccagctctatattcaggtg
gctggccgcgccggccgcgccggtaagcaaggcgaagtgctgttgcaaactcatcacccg
gaacaccccctgttgcaaatattgctgcatcagggatatgacgccttcgctgctcagacg
ctaagtgaacgcagaagcgttcagctgccgccttttactagtcacgccctgtttcgcgcg
gaagatcatgataaccagcaggccgccgcgttcctgcatcagctgcgcaatttgctggag
gcgagcccgctgcgcgacgaggcgctgtggatcatgggcccggtgccggcgttgcaggca
aaacgcggcgggcgctatcgctggcaattgctgcttcagcaccctgcccgtctgcggctg
caacagctgctgaaaacgacgatgccgttgatctctacgctgccgctatcgcggaaggtg
aaatggacgctcgacgtcgatccgacggaaagctaa
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