KEGG   Pantoea sp. PSNIH2: PSNIH2_19830
Entry
PSNIH2_19830      CDS       T03514                                 
Name
(GenBank) conjugal transfer protein TraB
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
panp  Pantoea sp. PSNIH2
Pathway
panp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:panp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSNIH2_19830
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:panp02044]
    PSNIH2_19830
Enzymes [BR:panp01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     PSNIH2_19830
Secretion system [BR:panp02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   PSNIH2_19830
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG FtsK_SpoIIIE AAA_22 TrwB_AAD_bind TerL_ATPase nSTAND3 ABC_tran AAA_29 AAA_16 cobW AAA_23
Other DBs
NCBI-ProteinID: AIX76025
LinkDB
Position
pKPC-56a:13488..16070
AA seq 860 aa
MRAATATKPKKIDAYRKEPSVNKKYLPYSYHLNDYVISMENGDLMAFFKLDGRTHDCASD
RELVTWHKDLNTLVKSFGTDHVELWTHEYHHEAKEYPDGEYDHFFPAYVDQYNRKLHGDS
KQLINDLYLTVIYKQVGDKTQKFLAKFEKPTRDEIQQMQNEALEGLEDISEQILEAMKPY
GIQQLGIYYRDKRGVEIPAPDKKEREELAEVDESDIFDEAIVIERNEPEPSQAHAYSKAL
EFLYFLANMEWAIVPVCRDRIREYIMDNRPVSSLWGDVVQIRTVDHNFYTTGIEFREYEE
DTEPGQLNMLKEADFEYLLTQSFSCLSESSAKTFLTHQEKSLQETRDRAQSQLAQLGTAL
DMLTSREFVMGYHHGTVHVWDNDQNAVQRKARRVKVMLTGCGVVGGTISLASEAAYYARL
PGNQKWAPRPVPINSWNFLHFSPFHNFMRGKPDNNPWGPALTMFRTISGTPLYFNFHVTP
LEELSYGKRPLGHALITGMSGEGKTTLLNFLLAQSMKYNPRLFVYDRDRGMEPFIRSVGG
YYKVLQQGMPSGFAPLQIEPTKRNIALIKNLFRICVETTNNGPISATMATELAEGVDAVM
GEGSLIPREARTVTILDGYVNEVVENGVSLKGLLREWTREGQYGWLFDNDKDSLDLSAND
IFGFDLSEFIAAKEEVSSPARTPLMMYLLYRVRDSIDGKRRVIQCFDEFHAYLDDPVIER
EVKRGIKTDRKKDAIYVFATQEPNDALSSRIGRTIMSQTVTKICLRDPEAIREDYAFLTD
AEYDALMSITEHSRQFLVKQGQQSAIASFNLYPRNSDDIDADIKTMDNVLSVLSGEPQNA
EIAHELVERLGNDPEGVGSG
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgagagctgccaccgctacgaagccaaaaaaaattgatgcctaccgtaaggagccatca
gtaaataaaaagtatttgccctattcttatcacctcaatgattacgtgatttcgatggaa
aacggcgatctgatggcttttttcaagctggatggccgcacacatgactgcgcatcagat
cgggaactggtcacctggcataaagaccttaatacgctggtcaagagcttcggaacagac
catgtagagctgtggacgcatgaatatcaccatgaggctaaagagtacccggatggtgag
tatgaccattttttccctgcttatgttgatcaatataaccgtaagctgcacggtgattcc
aagcagctgattaatgacctttatctgaccgttatttacaaacaggtaggggataaaaca
cagaagtttctggcgaaatttgaaaagccgactcgtgacgaaattcagcaaatgcagaat
gaggcgcttgaaggtctggaagatatttctgaacaaatcctggaagcaatgaagccgtat
ggcattcagcagttgggtatctattatcgtgacaaacgcggtgttgaaattcctgcgcct
gataaaaaagaacgtgaagaacttgctgaagtcgatgaatcagacatttttgacgaagcc
attgttatcgaacgcaacgagcctgaaccttcgcaggctcacgcttattcaaaagcgctg
gagttcctttatttcctcgcaaatatggaatgggccatcgtgcctgtttgccgtgatcgt
atccgtgagtacatcatggacaaccgccctgttagctccctgtggggggatgttgtccag
atcagaacggtagatcacaacttctataccaccggcattgaatttcgtgaatacgaagaa
gatacagagccaggccagcttaacatgcttaaagaagccgattttgaataccttctgacg
cagagtttttcttgcctctctgaatcttcagctaaaacgtttctgacgcatcaggaaaaa
tctttgcaggaaacgcgcgaccgtgcgcaaagccagctggcacagcttggtactgcgctc
gatatgctgacgtccagagagttcgtgatgggctaccatcatggaaccgtgcatgtctgg
gataatgaccaaaacgcggtacagcgcaaagcgcgtcgtgtgaaggttatgctaaccggc
tgtggcgtggttggcgggactatcagcctggcctctgaggctgcatattatgcgagactg
cctggcaaccagaaatgggcgccgcgcccggttccgataaactcatggaacttcctgcac
ttcagcccgttccacaattttatgcgtggcaagcctgacaataacccgtgggggccagcg
ctgaccatgttccgcacgatcagcggtacgccactctattttaatttccatgtgaccccg
cttgaagaactttcctacggtaaacgcccgctgggccatgcgttaataacgggtatgtcg
ggggaaggtaaaaccacgctgcttaacttcctgctggcgcagtcaatgaagtacaacccg
cggctttttgtttatgaccgtgaccgcggtatggagccgttcattcgaagcgttggtggc
tactataaagttctgcaacagggtatgccgtccgggtttgccccgcttcagattgaaccg
accaaacgcaatattgccctcattaaaaacctgttccgcatttgtgtggaaaccaccaat
aacgggcctatcagcgcaacgatggctaccgaactggctgaaggcgttgatgcggttatg
ggggaaggctcacttattccacgcgaggcgcgcaccgttactatcctggacgggtacgtg
aatgaagttgtggaaaatggcgtatcactgaaagggctgctgcgcgaatggacgcgcgaa
ggccagtatggctggctgtttgacaatgataaagacagcctggatctcagcgcgaatgat
atttttggcttcgatttatccgagtttatcgcagccaaagaggaagtatccagcccggcc
cgtactccgctcatgatgtaccttctgtaccgggtacgtgactccatcgacggcaaacgc
cgcgtcattcagtgctttgacgagttccacgcctaccttgacgatccggttatcgagcgt
gaagttaagcgtggtatcaaaactgaccgtaagaaagacgctatctatgtgtttgccacg
caggagccgaacgatgcgctgtccagccgtattggccgcacgatcatgtcgcagaccgtc
acaaaaatctgcctgcgcgatccggaagctatccgagaggattatgccttccttactgat
gctgaatacgacgcgctgatgtcgattaccgaacactccagacagttcctggttaaacaa
gggcaacagtctgcgattgcttctttcaatctctaccctcgcaacagcgacgatattgat
gcagatattaagacaatggacaacgttcttagcgtgttgtccggtgaaccacaaaacgcc
gaaattgcgcatgagctggttgaacggctcggtaatgaccctgaaggggtcggttccggc
tga

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