Pseudomonas antarctica: A7J50_1000
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Entry
A7J50_1000 CDS
T04830
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
panr
Pseudomonas antarctica
Pathway
panr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7J50_1000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panr03019
]
A7J50_1000
Enzymes [BR:
panr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7J50_1000
Messenger RNA biogenesis [BR:
panr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7J50_1000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ANF84441
UniProt:
A0A172YW65
LinkDB
All DBs
Position
complement(1171232..1172701)
Genome browser
AA seq
489 aa
AA seq
DB search
MLKALKKMFGKSEAEPFAPVPSAPVPSSDSRNDGQQPGRTAPVASPKKPPVTPPEQVLPA
EAAPAPAPAPKAPRRERAPKPPVTPWKLEDFAVEPQEGKTRFHDFKLAPELMHAIQDLGF
PYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALI
IAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDF
NQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKNERQTLLFSATFTEDVMNL
AKQWTTDPSIVEIEALNVASENVEQHIYAVAGADKYKLLYNLINDNGWERVMVFANRKDE
VRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHV
INFTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIETLLGRKISCETPPTHL
LRAVERKRP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcacttaagaagatgttcggcaaaagcgaggctgagccgttcgcgcctgtt
cccagtgctcctgtcccctcctccgacagccgcaatgacggtcaacagccaggccggacc
gcacctgtcgcctcgccgaagaaaccgccggtgacgccacctgaacaggtactgcctgct
gaggccgcccccgcaccggcgccggcgccgaaagcaccacgccgcgaacgcgcaccaaaa
ccgcccgtgaccccgtggaaactcgaagacttcgccgtcgagccccaggaaggcaaaacc
cgcttccacgatttcaaactggccccggaactgatgcacgccatccaggacctggggttc
ccgtactgcacgccgatccaggcgcaggtgctgggtttcaccctcgccggcaaagatgcc
attggtcgcgcgcaaaccggcaccggcaagaccgccgcgttcctgatttcgatcatcacc
cagctgctgcaaacgccgccgcccaaagaacgctacatgggtgagccgcgcgcactgatc
atcgccccgacccgggagctggtggtgcagatcgccaaggacgccgccgacctgaccaag
tacaccggcctcaacgtcatgacgttcgttggcggcatggacttcgacaagcaactcaag
cacctcgaagcccgtcactgcgacatcctggtcgccaccccgggccgcctgctcgacttc
aaccagcgcggcgacgtgcatttggacatggtcgaagtgatggtgctggacgaagccgac
cgcatgctcgacatgggttttatcccgcaagtacgtcagatcattcgccagaccccgccg
aaaaacgagcgccaaaccctgctgttctccgcgaccttcaccgaagacgtgatgaacctc
gccaagcagtggaccaccgacccgtccatcgtcgagatcgaagcgctgaacgtcgccagc
gaaaacgtcgaacagcacatctacgccgtcgccggcgccgacaagtacaagctgctctac
aacctgatcaacgacaatggttgggaacgcgtgatggtgttcgccaaccgcaaggacgaa
gtgcgccgcatcgaagaacgcctggtacgcgatggcgtcaacgctgcgcaactgtccggc
gatgtgccgcaacacaagcgcatcaagaccctggaaggctttcgcgaaggcaagattcgc
gtgctggtggccactgacgttgccgggcgcggaattcacattgatggcatcagccatgtg
atcaacttcaccctgccggaagtgccggacgactacgtgcaccgcattggccgtaccggc
cgtgcaggcgctgcgggtgtatcgatcagctttgccggggaagatgactcgtaccagctg
ccgtcgatcgagacgttgctgggtcgcaagatcagttgcgagacgccgccgacgcatttg
ctgcgggctgtggaacgcaaacgcccgtaa
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