KEGG   Pseudomonas antarctica: A7J50_1057
Entry
A7J50_1057        CDS       T04830                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
panr  Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:panr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:panr03032]
    A7J50_1057
   03036 Chromosome and associated proteins [BR:panr03036]
    A7J50_1057
   03400 DNA repair and recombination proteins [BR:panr03400]
    A7J50_1057
DNA replication proteins [BR:panr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    A7J50_1057
Chromosome and associated proteins [BR:panr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    A7J50_1057
DNA repair and recombination proteins [BR:panr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      A7J50_1057
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HTH_IclR SSPI
Other DBs
NCBI-ProteinID: ANF84498
UniProt: A0A172YWR0
LinkDB
Position
1229158..1229439
AA seq 93 aa
MAITKDQLIADLAEAVDAPKTTVRALLDQLSQVVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq 282 nt   +upstreamnt  +downstreamnt
atggctattactaaagaccaactgatcgctgacctggctgaagcagtagacgcaccgaaa
actaccgtgcgcgctctgctggaccaactgagccaagttgttgctgatcagctggaaaac
ggcggcgaaatcactctgccaggcgttggcaaactgaaagtgaccgagcgtccagcccgt
actggccgtaacccttcgactggcgccgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggccaaaggcctgaccgacgctgttaacaagtaa

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