Pseudomonas antarctica: A7J50_1057
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Entry
A7J50_1057 CDS
T04830
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panr03032
]
A7J50_1057
03036 Chromosome and associated proteins [BR:
panr03036
]
A7J50_1057
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_1057
DNA replication proteins [BR:
panr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A7J50_1057
Chromosome and associated proteins [BR:
panr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A7J50_1057
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A7J50_1057
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HTH_IclR
SSPI
Motif
Other DBs
NCBI-ProteinID:
ANF84498
UniProt:
A0A172YWR0
LinkDB
All DBs
Position
1229158..1229439
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AA seq
93 aa
AA seq
DB search
MAITKDQLIADLAEAVDAPKTTVRALLDQLSQVVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctattactaaagaccaactgatcgctgacctggctgaagcagtagacgcaccgaaa
actaccgtgcgcgctctgctggaccaactgagccaagttgttgctgatcagctggaaaac
ggcggcgaaatcactctgccaggcgttggcaaactgaaagtgaccgagcgtccagcccgt
actggccgtaacccttcgactggcgccgccatcgaaatcgctgccaagaaagttatcaag
ctggttgtggccaaaggcctgaccgacgctgttaacaagtaa
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