Pseudomonas antarctica: A7J50_1422
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Entry
A7J50_1422 CDS
T04830
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
panr
Pseudomonas antarctica
Pathway
panr03030
DNA replication
panr03430
Mismatch repair
panr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7J50_1422
03430 Mismatch repair
A7J50_1422
03440 Homologous recombination
A7J50_1422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panr03032
]
A7J50_1422
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_1422
Enzymes [BR:
panr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A7J50_1422
DNA replication proteins [BR:
panr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A7J50_1422
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A7J50_1422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ANF84853
UniProt:
A0A172YX44
LinkDB
All DBs
Position
1559936..1563457
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKTLVGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDNPLSRISLLAMNGVGYRNLTELISRGFIDGQRNGSIIIEREWV
AEASEGVIMLSAAKEGEIGIALLGGNPQEAEVLAREWMQVFPDRFYLEVQRTNRPNDEEH
LHAAVALADKLGAPLVATNDVRFIKKEDFEAHETRVCIGEGRALDDPRRSKNYSEEQYLK
SADEMAELFSDLPEALENSVEIAKRCNIEVKLGKHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYDAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWDMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRERAKVNEEPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEFKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEP
KAYQANIDRNRAVLLTAMEEAIKAAEQTARTHDSGHADLFGGLFVEADADVYANHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
IKRVMSMEDARTNLAESLRLKVKTEALKGDQLRWLGDLLKRHRGACPVTMEYTGNDAKAM
LQFGETWRIDPADGLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcacctacgcctgcacactgaatactccctggtcgacggcctg
gtacggatcaaacccctggtcaaaaccctggtgggcatgaatatgcctgcggtcgcggtt
accgatcagaacaacatgtgttccctggtcaagttctacaagaacgccatgggcgccggc
atcaagcccatttgcggcgccgacctgtggctgtccaacaaagacccggataaccccctg
agccgcatcagcctgctggcgatgaacggcgtgggttatcgcaacctcactgaactgatt
tcccgcggctttatcgacggccaacgtaacggctcgatcattatcgagcgcgagtgggtg
gccgaagcgagcgagggcgtgatcatgctctcggcagccaaagagggtgagatcggtatc
gcgttgctgggcggcaacccgcaggaagccgaggtgctggcccgcgagtggatgcaggtg
ttcccggaccgcttctatctggaagtccagcgcaccaatcgccccaatgatgaagagcac
ctgcacgctgccgtggccctggctgacaagctgggcgcgccgctggtcgcaaccaacgat
gtgcgttttatcaagaaagaagatttcgaggcccacgaaacccgcgtgtgcatcggcgaa
ggccgggctctggatgacccgcgtcgttcgaagaactacagcgaggagcaatacctcaaa
agcgccgacgagatggccgagttgttcagcgacctgcccgaagccctggaaaactccgtc
gagatcgccaagcgctgcaacatcgaagtgaagctgggcaagcacttcctgcccaacttt
ccgattcccgatggcatgaccatcgatgagtacttccgcaaggtgtcgttcgatggcctg
gaggaacgtctatccgttctgttgcccaaggacaccaccgaagactacgacgccaagcgc
caggtctatgttgatcggctgaatttcgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgttatggactttatccagtgggccaaaagcaacggcgtgccggtt
ggcccaggccgggggtcgggtgctggttcgctggtggcctatgtgcaaaagattaccgac
ctcgacccgctggaatatgaccttctgttcgaacggttcctgaacccggagcgggtttcc
atgcccgacttcgacgtcgacttctgcatggacggtcgcgaccgtgtcattgagtacgtg
gctgagaaatacggccgcaacgctgtaagccagatcatcaccttcggttcgatggcggcg
aaagcggtaatccgagacgtggctcgagtgcagggcaagtcctacggcctggcggatcgc
ctgtcgaagatgatcccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgtgacttcatcaaggtcgatgaagaagccgctgaaatctgggacatggca
cgcaaactcgaaggcgtggtgcgtaacgtcgggaaacacgccggtggtgtggtcatcgcg
ccgaccaagctgaccgacttttcgccgatctattgcgatgaagaaggcggcggcctggta
acccagttcgacaaggatgacgtggaggcggccggcctggtgaagttcgacttccttggc
ctgcggaccctgaccatcatcgactgggcgctcaagacgattaaccgcgagcgcgcgaag
gttaacgaagaaccgctggatatcgcgtttatcccgctggacgacaagcctacctaccag
ttgctgcaaaaagccgaaaccacggcggtgttccagcttgagtcgcgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggcgctgttc
cgtccaggcccactgcaatcgggcatggtggacgacttcatcaaccgtaagcacggccgc
gccgagctggcgtatccgcactccgactatcagtacgaaggcctcaagccggtactggcg
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcc
ggttacaccctcggtggtgcggacatgctgcgtcgcgccatgggtaagaaaaaacccgag
gaaatggccaagcagcgtggcggtttcattgaaggttgcgccacgaacaatatcgacgcc
gacctcgccggtaacattttcgacctggtggaaaaattcgccggttatggcttcaacaaa
tcccactccgccgcctacggcctggtctcgtaccagaccgcgtggctgaaagcccactac
ccggcgccgttcatggccgcggtactctcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcacgatgaagctgcgcctcgacgcaccggacgtgaacgcc
tcggagttcaagttcacggtgaacgacgaaggccgcatcatctacggcctgggcgcgatc
aaaggtgtgggcgaaggcccggtggaggcaatcaccgaggcgcgccaggatgggccgttc
aaggacctgttcgatttctgtgcgcgggtcgacctcaaacgcatcaacaagcgcaccctc
gatggcttgatccgcagcggcgcactcgatcgtctcggcccgtacttccatgatgagccg
aaggcttatcaggccaacatcgaccgcaaccgtgcggtgctgctgaccgccatggaagaa
gcgatcaaggccgccgaacagactgcccgcactcacgacagcggccacgccgacctgttt
ggcgggttgttcgtcgaagcagacgcggacgtgtacgccaaccaccgcaaggccaaggag
ctgaccctcaaggaacggctcaagggcgagaaagacaccctgggcctgtacctcaccggt
cacccgattgacgagtacgaaggcgaaatccgccgtttcgcccgtcagcgcatcatcgac
ctgaaaccggcacgggacacccagaccgtcgccggcatgatcatcgccctgcgggtgatg
aaaaataagaagggcgacaagatgggctttatcacccttgatgaccgctcgggccggatc
gaggcgtcgctgtttgccgatgccttccactccgcccagtcgttgctgcagaccgacgcc
atggtggtggtggaaggggaggtcagcaacgatgacttctccggtggcctgcgcctgcgg
atcaaaagggtgatgagcatggaagatgcgcgtaccaatttggcggaaagcctgcgtttg
aaggtcaagaccgaagccctcaaaggcgatcagctacgctggttgggtgacctgctcaaa
cgccaccgcggcgcgtgcccggtgaccatggagtacaccggcaatgatgccaaggccatg
ctgcagtttggggagacgtggcgaattgatcccgctgatggcttgattcaagctttgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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