Pseudomonas antarctica: A7J50_2862
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Entry
A7J50_2862 CDS
T04830
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
panr
Pseudomonas antarctica
Pathway
panr02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
A7J50_2862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
panr02044
]
A7J50_2862
Secretion system [BR:
panr02044
]
Type VI secretion system
Imp/Vas secretion system core components
A7J50_2862
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
ANF86255
UniProt:
A0A172Z137
LinkDB
All DBs
Position
complement(3162547..3163932)
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AA seq
461 aa
AA seq
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MNIDKPLYWHQGLFLQPQHFQQNDARLESLVTRTLACQQPHAWGLISMCLNDAALASRQC
RVEQLSVRFTDGSLVEYPGNASLECRPLALADFVSDSRTLYVGLKRSQPGEPDAQVFEDL
QDAQKANVRFAVRADPHTLNDRHGDAPEALVRQMSYVLRLFWEDELDNLGAYDLLPIARL
EHDGDRIHLAERYIAPCVMIGASPALMQTLRDTRDELVGRARQLEVFKQSGDARYGDFDA
AHTHNLLALVILNRYGPLLTHLLETPQVSPWQVYGTLRQLIGELSVFSERCDMLGQTRDG
RSLLTSYQHETSGQAITLAAGLIGQLLNEISVGSELLVRLLPSEGLFQSSLPDAFLGPRH
RYYLVVRSDGDPTRLAQQLELDGKLGAPQDMPDLINRALPGVELIYLQVPPQGMPRRPGA
LYYRLEPLSEAWEKVCSTQAAALFMPNAPADMLVELVVVRA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgacaaaccgctctactggcatcaaggcctgttcctgcagccgcagcacttt
cagcagaatgacgctcgcctggaaagcctcgtgacgaggaccctcgcctgccaacaaccc
catgcctgggggctgatatcgatgtgtttgaatgatgctgcactggcgtcgcgtcaatgt
cgggttgaacaactgtcggtgcggtttaccgacggcagcctggtcgaataccccggcaac
gcctcactggaatgccgcccgctggcgcttgcagactttgtcagcgacagccgcacgctg
tatgtcggcctcaagcgcagccagccgggcgaaccggatgcccaggtgttcgaagacctg
caagacgcccaaaaagccaacgtgcgttttgccgtaagggccgacccgcacacactgaat
gatcgtcacggcgacgcccccgaagcgctggtgcggcaaatgtcctacgttttgcgcttg
ttctgggaagatgaactggacaacctcggcgcctatgacttgctgcctatcgcgcggttg
gagcacgacggtgaccgcattcatttggccgagcgttacatcgcaccttgcgtgatgatc
ggtgcctcgccggcgttgatgcaaacgttgcgagacacccgtgacgaattggtcggccga
gcccgccagctggaggtgttcaagcaatccggcgacgcgcgttacggcgacttcgatgcc
gcacacacgcacaatttgctggcattggtgatcctcaaccgttatggcccattgctgact
cacttgctggagacgccacaagtctcgccgtggcaggtgtatgggacgctgcgtcaattg
atcggcgaactcagtgtgttcagcgagcgctgcgacatgctggggcaaacccgcgacggt
cgatcgctgctgacgtcctatcagcatgaaacctccggccaggccattaccctggctgcc
gggttgatcggccaattgcttaacgagatcagcgtcggttcagaactcctggtgcggttg
ctgcccagcgaggggttattccaaagcagcttgccggacgcatttctcggcccgcgccac
cgctattacctggtggtccgcagcgatggtgatccgacgcgactcgcgcagcagctggaa
ctggatggcaagttgggtgcgccgcaggacatgccggacctgatcaaccgtgcattgccg
ggggtcgagctgatttacctgcaagtgccgccgcaaggcatgccccgtcgtcccggagcg
ctttattaccgcctggagccactgagcgaagcctgggaaaaagtctgcagcacccaggca
gccgcattgtttatgcccaacgccccggcagacatgctggtcgagctggtggtggtacgc
gcatga
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