Pseudomonas antarctica: A7J50_3040
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Entry
A7J50_3040 CDS
T04830
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panr03032
]
A7J50_3040
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_3040
Enzymes [BR:
panr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A7J50_3040
DNA replication proteins [BR:
panr03032
]
Prokaryotic type
DNA Topoisomerases
A7J50_3040
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A7J50_3040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ANF86427
UniProt:
A0A172Z1P9
LinkDB
All DBs
Position
3356249..3357298
Genome browser
AA seq
349 aa
AA seq
DB search
MPDSALTADLPRDLHYVDDTQPGIRRKKLRGKFQYVDAKGQRITDAEEIKRLNALAVPPA
YTDVWICADPRGHLQATGRDARGRKQYRYHTRWREVRDTDKYSRLQEFGNALPKLRKQLE
AQIAAPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRNRHVDVKGSEIQFQ
FRGKSGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEAGERHTVSSHDVNAYLHSLTG
ADFTAKDYRTWAGTAMALAVLRELAWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIH
PAVLEHFSLGELSSLPKPRKRTGLKAEEVALAMFLEQLAADLPKNAKVR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactctgccctgactgccgacctgccccgcgacctgcattacgttgacgacacc
cagcccggcattcgccgtaaaaagctgcgcggcaaattccagtatgtcgacgccaaaggc
cagcgcatcaccgatgccgaggaaattaaacgcctgaatgccctggccgtgccgccggcc
tacaccgacgtgtggatctgcgccgacccgcgcggccatctgcaagcgaccggccgcgat
gcgcgcggtcgtaaacagtaccgctaccacacgcgctggcgtgaggtgcgcgacaccgac
aagtattcgcggctgcaggaattcggcaatgccttgcccaaactgcgcaagcaactggag
gcgcaaatcgccgccccaggcttcacgcgcgagaaagtcctggccacggtggtgatgctg
ctggatgccacgctgatccgtgtcggcaacacccaatacgcccgcgacaacaaatcctat
gggctgaccaccctgcgcaaccgccatgtggacgtcaagggcagcgagatccagttccag
tttcgcggcaagagcggcgtcgagcatcagatcagcgtcaaggaccgacgcctggccacg
gtggtcaagcgttgcttggaattgccggggcagaacctgtttcagtacctggacgaagcc
ggcgagcgccacacggtcagctcccacgacgtgaatgcgtatttgcacagcctgaccggc
gccgacttcaccgccaaggactaccgcacctgggccggtaccgcgatggcgctggcggtg
ctgcgagaattggcgtggcaaccggaatccgacgccaagcggcatgtggtggccatggtc
aaggatgtcgccaagcaactgggcaacaccccggcagtgtgccgcaagtgctatatccac
ccggcggtgctggagcatttcagcctgggtgaactgtccagtttgccaaaaccgcgcaag
cgcacgggcttgaaagccgaggaagtcgccctggcgatgttcctcgaacaattggccgct
gacttgccgaagaacgccaaggtgcgttag
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