Pseudomonas antarctica: A7J50_3052
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Entry
A7J50_3052 CDS
T04830
Name
(GenBank) transcriptional regulator
KO
K06599
AraC family transcriptional regulator, chemosensory pili system protein ChpD
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panr03000
]
A7J50_3052
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
panr02035
]
A7J50_3052
Transcription factors [BR:
panr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
A7J50_3052
Bacterial motility proteins [BR:
panr02035
]
Pilus system
Chemosensory pili system proteins
A7J50_3052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
AraC_binding_2
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ANF86439
LinkDB
All DBs
Position
3365163..3365954
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AA seq
263 aa
AA seq
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MSAIQHAWLGNYEVSSTTCTGLTFARHSHDECVIGVNLVGEEKVWLDRREFEAGPGTITL
YNPGQIQGGGAAEGAPWHFVSLYVTADQLAADLGLSHLEFDRSLCFQPDLAQRVAAAVKG
ALSNDTWVREFNEEALVLRLGEVVGVSGVRLPGSTNTGNRMIGRAQELLASHLHQSLPLD
ELGNELGLSKFHLLRVFQKETGMSPRQWAMQLRTCRAKGLLRNGISASDVAHGLGFADQS
HLNRHFRAAYGITPGRYQSVLKR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccattcaacacgcctggctgggcaactacgaagtcagcagcaccacctgcacc
ggcctgacctttgcccgtcacagccatgatgagtgcgtgatcggcgtcaaccttgtcggt
gaggaaaaagtctggctcgatcgccgggagttcgaggccgggccgggcaccatcaccttg
tacaacccgggtcagatccagggcggcggcgcggctgagggagcaccttggcactttgtc
agcctgtacgtcaccgcggatcaactggcagctgacctggggctgtcgcacctcgaattt
gatcgctcgctctgctttcaacctgacctcgcgcaacgggtggccgcggccgtgaaaggc
gccttgagcaacgatacgtgggtccgtgaattcaatgaggaagccctggtgttacggttg
ggagaagtggtcggcgtcagcggtgtacgcttgcctggcagcaccaacaccggcaaccgc
atgatcggtcgcgcccaggaattgcttgcctcgcacctgcatcagtcactgcccctggac
gagctgggcaatgaattgggactgtccaaattccatctgttgcgtgtctttcaaaaagaa
accggtatgagccccaggcagtgggccatgcaactgcgtacctgccgcgccaaaggactg
ttgcgcaacggcatctcggccagtgacgtcgcccatggcctgggctttgccgaccaaagc
cacctcaatcgacacttccgcgccgcctatggcatcacccctggccgctatcaaagcgtg
ttgaaacgctga
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