Pseudomonas antarctica: A7J50_3218
Help
Entry
A7J50_3218 CDS
T04830
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_3218
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7J50_3218
Archaeal homologous recombinant proteins
A7J50_3218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
PP1c_bdg
ABC_tran
nSTAND3
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANF86601
UniProt:
A0A172Z2J8
LinkDB
All DBs
Position
3560485..3564123
Genome browser
AA seq
1212 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LGDTGQAKMPDADSDISIGDPRTLLRRGTGGGYAEVDFVGVSGRRYRARWEANRARDKAS
GKLQNSRQSLIDLDSDQLLASQKTEYKTQLELALGLNFEQFTRAVLLAQSEFSAFLKAND
NERSELLEKLTDTALYTQLGRRAFDKAKDAKDAHKQLQDQATGVVPLPAEARAELDQQLA
EAQQQLKTQQAQLKQLELQHTWLKELREWQERQHHATEQLQRAQADWAGQGQQRQDLSRL
EQLAPQRHQFARQAELATLLAPLAAQIQQHLAQQTTLQARQEQAQQQQSAAQAALADALK
QQADAVPLLRQAFEAQSTLAHLTQDLTKRSDDKQQQESACQEGQALLTGLLEKQTQVTER
LQRLAAELERSATLAPLSDAWSAYRDRLQQLMLIGNRLNKGQSELPQLEQCATAAADKFA
QQRDALDLLYQEAGAEPHAVAEQIQLLASLLQDNRKQQRAFEDLTRLWDSQQQLDQQAAA
LTQKLADAQQQREQLNQTGLQTKAELTVAEQTLTVTKQLLERQRLARSASVEELREQLQD
DQPCPVCGSHEHPYHQPEALLQSLGRHDENEEATAQKAVDTLKEKLTELRGEVGGLIAQQ
KEFLQQQEQLATQQQGLTPSLQAHPLAASLFNQDAAKRSTWLAQQLAQLTQSISQDEQRQ
GALLNLQQNAGRLQQQLQAAQDASQQARQLLVDQQRELSNDRERLDEELHAFASLLPAET
LEGLRREPAATFMQLDQHVSQRLEQLGHQRDELAEQHERQQAIEKEHTHQQHRQQQLDAL
LQQVTELSARQQTAQATLSALLGEHSSAEQWQQQLDQAVAQSRQSETDANQQLQEIRNAL
IQLAADLKAQQDRQQALAAEQHTLGERLSEWRALHPDLHDEGLTRLLAFDDSHVSALRQQ
LQHSEKAVEQAKVLLQEREQRLAEHQALHNGNLAAEQLDAALAALNQQLAEGEKTCAELR
ARQSEDQRRQDANHVLAEHIAKAYDEWQRWARLNALIGSATGDTFRKIAQAYNLDLLVHH
ANVQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASMA
SSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQVK
RQGNGLSTLEVK
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgccatccgcctgaaaaacctcgcctccctggcaggcccgtttgaaatc
gactttaccgccgagcccttggccagcgccgggttgttcgccatcaccgggccgaccgga
gcgggcaaaagtaccttgctggatgccttgtgcctggcgctgtttggcgcggtgccgcgc
ctgggcgataccggccaggcgaaaatgccggatgccgacagcgacatttccatcggcgac
ccgcgcaccctgctgcgtcgcggcaccggcggtggctatgccgaggtggattttgtcggc
gtcagcggccgtcgctaccgtgcgcgctgggaagccaaccgcgcccgtgacaaggccagc
ggcaagttgcagaacagccgacaaagcctgatcgacctggacagcgaccaactgctggcc
agccagaagactgaatataaaacccagctggaactggccctgggcctgaatttcgaacag
ttcacccgcgcggtgttgctggcgcaaagcgaattcagtgccttcctcaaggccaacgat
aacgagcgcagcgagctgctggaaaagctcaccgacaccgcgctctacacccagttgggc
cgtcgcgccttcgacaaggccaaagacgccaaggacgcgcataaacagctgcaagaccag
gccaccggcgtggtgccgttgcccgccgaagcccgcgccgaactcgatcaacagttggcc
gaggctcagcaacagctcaagacccaacaggcccaactcaagcagttagagctgcagcac
acctggctcaaggagctgcgtgagtggcaggagcgccagcaccatgcaacagagcaactg
caacgggcgcaggcggattgggcaggccagggccagcagcgccaagacctgagccgactg
gagcaattggcaccgcaacgccatcagtttgcgcgccaggctgaactcgctacgttactt
gcaccgctcgccgcgcagattcagcagcacctcgcgcagcaaaccacgctgcaggcgcgt
caggagcaggcgcaacagcagcagtccgccgcccaggcagccttggctgacgccctgaaa
cagcaggccgacgccgtgcccttgttgcgtcaggcgttcgaagcacagagcaccctcgcc
cacctgacccaagacctgaccaagcgcagcgacgacaaacagcaacaagaaagcgcctgc
caagaaggccaggccttgctcaccgggttgctggagaagcaaacccaagtcaccgaacgc
ctgcaacgcctggcggccgagctggaacgcagtgccactctggcaccgctgagcgacgcc
tggagcgcctaccgcgaccgtctgcaacagctgatgctgatcggcaaccgcctcaacaag
ggccagagcgagctgccgcaactcgaacagtgcgccaccgccgcagccgacaagttcgcc
caacaacgcgacgcgctggacctgctgtatcaggaagccggtgccgagccgcacgcggtc
gccgagcagattcaattactcgccagcctgctgcaagacaaccgcaagcaacagcgcgcc
ttcgaagacctcacgcgcctgtgggacagccagcaacagctggaccaacaggctgctgca
ttaacgcaaaagctcgcggacgcccagcagcaacgcgagcaactgaaccaaaccggcttg
caaaccaaggccgaactgacggtggccgaacaaaccctgacggtgaccaagcaactgctg
gaacgccagcgcctggctcgcagtgccagcgtcgaggaattgcgcgagcagttgcaggac
gaccaaccgtgcccggtgtgcggcagccatgagcatccgtaccaccagcccgaagcgttg
ctgcaaagccttggccgtcatgatgaaaacgaagaagcgacggcgcagaaagcggtcgac
acgctcaaggaaaaactcaccgagctgcgtggcgaagtcggcggtttgatcgcccagcaa
aaggagttcctgcagcagcaggagcaactggcgacccagcaacaaggcctgacacccagc
ctgcaagcgcacccattggccgcctcgttgttcaatcaggacgccgccaaacgcagcacc
tggctggcccagcaactggcgcaactgacgcaaagcatcagccaggacgaacaacgccag
ggcgccctgctcaaccttcagcaaaatgccgggcgcttgcagcaacaactgcaagccgcc
caggacgcaagccagcaagcccgccagttgctggtggaccagcagcgcgaactgtccaac
gaccgcgagcgcctcgacgaagaactccatgccttcgccagcctgctgcccgccgaaacc
ctcgaaggtctgcgccgtgaaccggcggcgacgtttatgcagttggaccagcacgtcagc
caacgccttgagcaactgggccaccagcgcgatgaactggccgagcagcatgagcgccag
caggccatcgagaaagaacacacccatcagcagcatcgccagcagcaactggacgccttg
ctccagcaggtcaccgagctgtctgcacggcaacagaccgcgcaggcaacactcagcgca
ctgctcggcgagcacagcagtgccgaacagtggcaacagcaactggaccaggcggtggcc
cagtcacgccaaagcgagaccgatgccaaccaacagctgcaagagatccgcaacgcgctg
attcaattggccgccgacctcaaggcgcagcaggatcgccaacaggctttggccgccgag
cagcacaccctgggcgaacgcctgagcgaatggcgtgccttgcaccccgacctgcatgac
gaagggctcacgcgcttgctggcctttgatgacagccacgtcagcgcattgcgccagcag
ttgcagcacagcgaaaaagccgtcgaacaagccaaggtgctgctgcaggaacgcgaacaa
cgcctggctgaacaccaagcgttgcacaacggcaacctggcagccgaacaactggacgcc
gccctggctgcgctcaatcagcaattggccgaaggtgagaaaacctgcgcggaactgcgt
gcgcgccagtccgaagaccagcgccgccaggacgccaaccacgtgttggccgagcatatc
gccaaggcgtatgacgagtggcagcgctgggcacgcctgaatgcgctgatcggctcggcc
accggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgttggtgcaccac
gccaacgtgcaactgcgccagctggtgcgccgctaccgtctcaagcgtggcggcagcatg
ctcgggttgctggtgatggatacggagatgggcgacgaattgcgctcggtgcattcgttg
tccggtggcgaaacattcctggtgtcactggcgctggcgttgggcctggcttcgatggcg
tcgagtacgttgaaaatcgagtcgctgtttatcgacgaaggctttggcagcctcgacccg
gaatcgctgcaattggcgatggacgccttggacggcctgcaggcacaaggccgcaaggtg
gcggtgatctctcacgtgcaggaaatgcacgagcgcatcccggtgcagatccaggtcaag
cgccagggcaatggcttgagcaccctggaggtcaagtga
DBGET
integrated database retrieval system
