Pseudomonas antarctica: A7J50_3539
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Entry
A7J50_3539 CDS
T04830
Name
(GenBank) Autotransporter assembly factor TamB
KO
K09800
translocation and assembly module TamB
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panr02000
]
A7J50_3539
Transporters [BR:
panr02000
]
Other transporters
Pores ion channels [TC:
1
]
A7J50_3539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ANF86916
UniProt:
A0A172Z3Z1
LinkDB
All DBs
Position
complement(3938490..3942176)
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AA seq
1228 aa
AA seq
DB search
MRGLKIAGLAIVAVLVLALLALWTVLGTQAGSRWVLNQVPGLTVENFQGHLGGQWSADHL
LWQQDASRVELNAPKFDWSPACLLRMTLCINQLDVEQVSLQFPPSAEESSSGPIQLPELK
LPVAIQLGDVRVGSLLFNGSEELKGLQLAAHWTAAGMQIDSVHVQRDDLVLDLAGLLQPT
GNWPLNATGNLSLPYAPGGAPWKVALKVDGDLLKTLKLDADSSGYLPAKLSGELQPLAEN
LPAQLHITADGFKPSAELPDTLQLNQLDLTAKGDLSNGYQLLGKAVLPADKGPVDLLLQG
KVDAKGAQIAGLDLSAGDKQSLKLSANLDWQQGFSADAKIDWLDFPWHRLYPLIDEPQVA
LRTFNGEIAYKDGNYLGNLKADLDGPAGKFNVVTPFSGDLKQVFLPELKLTAGQGKAEGH
LNLQFADGIAWDTALDLSALNPAYWVAELPGTLAGPLRSKGEFKNEQLKLNADLDLKGRL
RGQTAVLAAKAEGAGEQWTLANLDIRLGDNRINGSGSLQQRLAGQIDIKLARLAQLWPQL
RGQINGRVDVAGTLKAPQGKLDLKGQQLAFADNHLQNLNLDATLDNAQRAKIDLKGTGIQ
TGDTQVGTLTASAQGDIKSQKVQLDLAGPLLKLALALDGNLDKGNWRGRLASGEVQAGGQ
DWKLQAPAKIERLADGKLTFAAHCWVSGPASLCGEDQRLMPEPKLRYHLKQFPIDSLAAF
LPKDFAWQGKLNADVQLDLPASGPKGVVSVDASGGTLRVKDKDQWLDFPYDTLKLETTLN
PKRIDTQLNFRGGKLGELLLQAQINPLPKNKPITGNFSLNGLDLAVARPFVPMVEKLSGK
LNGNGRISGGLLAPQVNGSVNLVGGEIAGPELPISLEGLNVQALIAGESVQLNGAWHSGK
AGQGSLKGQVDWGQALVVDLSLQGSQLPVTVEPYATLEVAPDLKISLKNDKLAIAGKVHI
PRGDITVRELPPSTVKVSDDTLIVGSQTEEGKPPMAMAMDIDVEVGEDQLNFAGFGLTAK
VQGHVHIGDNMDTRGELWLNDGRYRAYGQRLNVRRARLLFAGPLDQPFLDIEAVRVVTEP
SRTVTAGIRLSGSAEQPTTQIFSEPAMPQEDALSYLVLGRSRNNTGEDNNMLAEAALGLG
LMGSAGVTSDIANKLGIQDFDLDTQGSGNTTAVVASGKITEKLSLRYGVGVFEPASTIAL
RYLLSKKVYLEVASGVASSLDIFYKRDF
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtttgaaaatagcagggctggccatcgtggctgtcctcgtcttagcgttgttg
gcgctgtggaccgtgctcggcacccaggcgggcagccgctgggtcctgaaccaagtgccg
ggtttgacggtggagaatttccagggccacttgggtggccaatggagtgccgatcatctg
ctgtggcagcaggacgccagccgggtcgagctcaacgcaccgaagtttgactggtcgccg
gcgtgcctgctgcgcatgaccttgtgcattaatcagctggacgtggagcaggtcagcctg
cagtttccacccagcgcagaagaaagtagcagcgggccgatccaattgccggagctgaaa
ctgccggtagcgatccagttgggcgacgttcgcgtcggcagcctgctgtttaacggcagc
gaagagctcaaaggcctgcaattggccgcgcactggacggctgccggtatgcagatcgac
tcagtgcacgtgcagcgcgacgacctggtgctggacctcgccggtctgttgcaacccacc
ggcaattggccgctgaatgccaccggcaacctgagcctgccttacgcccccggcggcgcg
ccgtggaaggtggccctcaaggtggacggcgacctgctcaagaccctcaagctcgatgcc
gacagcagtggctacttgcccgccaaactcagtggcgagctgcaaccgctggcggagaac
ctgcccgcgcagttgcacatcaccgccgatggcttcaagcccagcgccgagttgcctgac
accctgcaactcaatcaactggacctcaccgccaagggcgacctgagcaacggctaccaa
ctgttgggcaaagccgtgctgccggcggacaaaggtccggtggacttgctgttgcaaggc
aaagtcgacgccaagggcgcgcagatcgctggcctggacttgagtgccggggacaagcaa
agcctcaaactcagcgccaatctggattggcagcaaggcttcagtgccgacgccaagatc
gactggctggatttcccctggcaccgcctctaccccttgattgatgaaccgcaggttgcg
ttacgcaccttcaatggcgagatcgcctataaggacggcaactacctcggcaacctcaag
gccgacctcgacggcccggccggtaaattcaatgtggtgacgccgttcagtggcgacctc
aagcaggtcttcctgcccgagttgaaattgaccgcaggccaaggcaaagccgaaggccat
ctgaacttgcaatttgccgatggcattgcctgggacacggcgctggacctgtcggcgctg
aacccggcgtactgggtggcggaattacccggcaccttggccggcccgctgcgcagcaaa
ggcgagttcaaaaatgaacaactcaagctgaacgccgacctcgacctcaagggccgtttg
cgcggccaaaccgctgtgctggcggccaaggccgaaggcgcgggtgagcaatggaccctc
gccaacctggatatccgcctgggcgacaaccgcatcaatggcagcggcagcctgcaacaa
cgcctggccggtcagatcgatatcaaactggcgcgcctggcccagttgtggccgcagtta
cgtgggcaaatcaatgggcgggtcgatgtggccgggacgctgaaggcaccccaaggcaag
ctcgaccttaaaggtcagcaactggccttcgccgacaatcacctgcaaaacctcaacctc
gacgcgacgctcgacaacgcccagcgcgcgaagatcgacctcaagggcacgggcatccaa
accggcgatacccaggttggcaccctgaccgccagtgcccaaggcgatatcaagagccag
aaggtccagctggatctggcggggccgctgctcaagctggccctggcgttggacggcaat
ctcgacaaaggcaactggcgcgggcgcctggccagcggcgaggtgcaggccggtggccag
gactggaaactgcaggccccggcgaagatcgagcgcctggccgacggcaagctgaccttt
gcggcgcattgctgggtgtctggccctgccagcttgtgcggcgaagatcagcggctgatg
cctgagccgaaactgcgttaccacctcaagcaattccccatcgacagcctggcggccttc
ttgcctaaagatttcgcctggcagggcaagctcaacgccgatgtgcagctcgacctgccc
gccagcgggcctaaaggcgtggtgtcggtagacgccagcggcggcacgttgcgcgtgaaa
gacaaggaccagtggctggatttcccctacgacaccttgaagctggaaaccaccctcaac
cccaagcgcatcgacactcagctcaacttccgcggcggcaagctcggtgaattactgttg
caggcgcagatcaatccgctgccgaagaacaagccgattaccggtaacttcagcctcaac
gggctggacctcgcagtggcgcggccgtttgtgccgatggtggaaaaactcagcggcaag
ctcaacggcaacggccgcatctccggtggtttgctggcgccgcaggtcaatggcagcgtg
aacctcgtcggcggggagatcgccgggcctgaactaccgatcagccttgaaggcttgaac
gtacaggcgttgattgccggcgaaagcgtgcagttgaacggcgcctggcacagtggcaaa
gccgggcagggtagcctcaaggggcaggtcgactggggccaggccctggtggtggacctc
agtctgcaaggctcgcaactgccggttacggtagagccttatgccacgctggaagtggcg
cccgatctgaagatcagcctcaaaaacgacaagttggcgattgccggcaaggtgcacatc
ccgcggggcgacatcaccgtgcgtgaattgccgccgtcgacggtcaaggtctcggatgac
acgctgatcgtcggcagccagaccgaggagggcaagccgccaatggcgatggccatggat
atcgatgtggaggtgggcgaagaccagcttaacttcgcgggctttggcctgactgccaaa
gtgcagggccatgtgcatatcggcgacaacatggacacccgtggcgagctgtggctcaac
gacggccgctaccgcgcctatggccaaaggctcaacgtgcgccgtgcgcgactgttgttc
gccgggccgctggatcaaccgttcctggatatcgaagccgtgcgtgtcgtcaccgaacct
tccagaacagtcacggccgggattcgcctgagcggcagcgctgaacagccgaccacgcag
attttctccgagccggccatgccccaggaggatgcattgtcgtacttggtgctggggcgt
tcgcgtaacaacaccggtgaggacaacaacatgctcgccgaagcggccttgggcctgggc
ttgatgggcagcgccggggtgacctcggatattgccaacaagttgggtatccaggacttc
gacctcgatacccagggcagtggcaacaccaccgccgtggtggccagcggcaagatcacc
gaaaaactcagcctgcgttacggggtaggcgtgttcgagccggccagcaccattgccttg
cgctacttgttgagcaagaaggtctacctggaagtggccagtggcgtggccagctcgttg
gatatcttctacaaacgggatttctaa
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