Pseudomonas antarctica: A7J50_3886
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Entry
A7J50_3886 CDS
T04830
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
panr
Pseudomonas antarctica
Pathway
panr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7J50_3886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_3886
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7J50_3886
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A7J50_3886
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
HAMP
AAA_30
AAA_22
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
ANF87251
UniProt:
A0A172Z4I4
LinkDB
All DBs
Position
complement(4296291..4298306)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQTNRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPEAYLKMVLHVDRGDKLDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRANNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGQAPPTLFDYLPDDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEFESISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPQ
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLENGIIPRGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccagctcgtcacccgttttgaacccgccggcgaccaacccgaagccatt
cgcctgatggttgaaggcatcgaagccggcctggcgcaccagacgctgctcggggtgacc
ggttcaggcaagaccttcagcatcgccaacgtgattgcgcagaccaatcggcccaccttg
gtgctggcgccgaacaagaccctggccgcgcagctctacggcgagttcaaggcgtttttc
ccgaacaacgcagtggaatacttcgtttcctactacgactactaccagcccgaagcgtat
gtgccgtcctccgatacctttatcgagaaggatgcgtcgatcaacgaccacatcgagcag
atgcggctgtcggcgaccaaggcgctgctggagcgcaaggacgcgatcatcgtcaccacg
gtgtcgtgcatctacggcctgggcagcccggaagcttatttgaagatggtgttgcacgtt
gatcggggcgacaaactcgaccagcgcgagctgctgcggcgcctgacgagcttgcaatac
acccgcaacgacatggactttgcccgcgccaccttccgcgtacgcggtgatgtgatcgac
atctacccggcggagtccgacctggaagcgatccgcatcgagctgttcgacgatgaagtc
gagagcctgtcggccttcgacccgttgactggcgaggtgatccgcaagctgccgcgcttc
accttctacccgaaaagccactatgtgaccccgcgcgaaaccctgatgggcgccatcgag
ggtatcaaggtcgagttggccgagcgcctggaatacctgcgtgccaacaacaagctggtg
gaagcccagcgcctggagcagcgcactcggtttgacctggagatgatcctcgagctgggt
tactgcaacggcatcgaaaactactcgcgctacctctcggggcgcgaatccgggcaggcg
ccgccgaccctgtttgattacctgccggacgacgccttgctggtgatcgacgagtcccac
gtcagcgtgccgcaggtgggggcgatgtacaaaggtgaccgttcgcgtaaggaaaccttg
gtggaatacggcttccgcctgccttcggcgctggataaccggccgatgcgttttgacgag
tttgaaagcatcagcccgcagacgatttttgtctcggccacgccgggtaactacgaagcc
gagcatgcgggacgcgtgattgagcaactggtgcgcccgaccggcctggtggacccgcaa
atcgagatccgcccggcgctgacccaggtcgatgacttgctctcggagatcaccaaacgc
gtggccctggaagagcgggtgctggtcaccacgctgaccaagcgcatgtccgaagacttg
actgactacctggccgaccacggcgtacgcgtgcgctatttgcactcggacatcgacacc
gtggagcgcgtcgagattatccgcgacctgcgcttgggcacctttgacgtgctggtgggg
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcactggtggcgatcctcgat
gccgacaaggaaggcttcctgcgttccgagcgctcgttgatccagaccatcggccgtgcg
gcgcgcaacctcaatggccgggcgattctttacgcggatcgcatcaccggctccatggaa
cgggcaattggcgagaccgagcgccgccgtgacaagcagattgccttcaacctggagaat
ggcatcatcccgagaggcgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
cccggttcgcgcagcaagaagcgcaagggtatggccaaggctgccgaagaaagcgccaag
tacgaaaacgaactgcgctcgccgagtgagatcaccaagcggattcggcagttggaagag
aagatgtaccagctggcgcgggatcttgagttcgaagcggccgcgcagacgcgggatgag
atcggcaagttgcgggagcggttgttggctgtttga
DBGET
integrated database retrieval system
