Pseudomonas antarctica: A7J50_4208
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Entry
A7J50_4208 CDS
T04830
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
panr03009
]
A7J50_4208
Enzymes [BR:
panr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7J50_4208
Ribosome biogenesis [BR:
panr03009
]
Prokaryotic type
rRNA helicases
A7J50_4208
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
ANF87566
UniProt:
A0A172Z5X1
LinkDB
All DBs
Position
complement(4640520..4641866)
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AA seq
448 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVAECVNRQQTM
LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIVMADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQDYKAFVLHGEKDQKDRKLAIDRLKAGGVKILVAT
DVAARGLDVDGLDMVINFDMPRSGDEYVHRIGRTGRAGNNGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKVDAKGDKKKAGAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgcctgtgcaagcagcggccatcccgctcgcgctcgaagggcgtgacctg
cgggtgacggctcaaaccgggagtggcaagactgccgctttcgtcctgccgattctgaac
cgcctgattggcccggccaaagtccgtgtcagcatcaagaccctgatcctgctgccgacc
cgtgagctggcccaacagaccttgaaggaagtggagcgcttctcgcagttcaccttcatc
aagtccggcctgatcaccggcggcgaagacttcaaggtccaggccgcgatgctgcgcaaa
gtgccagatattctgatcggcaccccaggccgcatgatcgagcaactcaatgccggcaac
cttgacctcaaggaagtcgaagtactggtactcgacgaagccgaccgcatgctcgacatg
ggctttgccgacgatgtgcaacgcctggtggccgagtgcgtcaatcgccagcagaccatg
ctcttttccgccaccaccggcggttcgaccctgcgcgacatggttgccaaggtcctgaac
aatcctgagcacttgcaggtcaacaacgtcagcgatctgaacgcgaccacgcgccagcag
atcgtcatggccgaccacaatgtgcacaaagaacagatcctcaactggctgctggccaac
gagacctatcaaaaagccatcgtattcaccaatacccgcgccgctgccgaccgtatctac
ggtcgcttggtcgcgcaggactacaaggcattcgtgctgcacggtgagaaagaccagaag
gatcgcaagctggccatcgaccgtctcaaggccggcggcgtgaaaatcctggtggccacc
gacgttgctgcccgcggcctggacgtggatggcctggacatggtcatcaacttcgatatg
ccacgcagcggcgacgaatacgtgcaccgtatcggccgtaccgggcgtgccggcaacaat
ggcctggcgatctcgctgatctgtcacggcgactggaacctgatgtcgagcatcgaacgc
tacctcaagcagtcgttcgagcgccgcaccatcaaggaagtcaaaggcacttacaccggg
ccgaagaaggtcaaggcgtcgggcaaagccgtcggcgtgaagaagaaaaaagtcgatgcc
aagggcgacaagaaaaaggccggcgccaagtcgccgaccaagcgcaagatcgccaatcgg
ccgaagaccgacaacctgtcgctcgtcagcaaggacggcatggcgccgctcaagcgtcgc
aagccagaagcgcctgctgccgagtaa
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