Pseudomonas antarctica: A7J50_4709
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Entry
A7J50_4709 CDS
T04830
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
panr
Pseudomonas antarctica
Pathway
panr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
A7J50_4709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_4709
Enzymes [BR:
panr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
A7J50_4709
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
A7J50_4709
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7J50_4709
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A7J50_4709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ANF88055
UniProt:
A0A172Z6C6
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All DBs
Position
complement(5174755..5176182)
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AA seq
475 aa
AA seq
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MTTIFWYDYETTGINPRSDRPLQVAGIRTDLELNEVGPPVNLYCRPSDDILPHPAACAIT
GITPGILAEKGLAEADFMTRVHAELAATGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRTAYALRPEGIVWPEQDGRVTLKLERLTEANGIDHGQAHDALSDVR
ATIALARLVREKQPKLYDWLFQLRSKQRVMDQVRLLQPMVHISGRFSAARHYLGVVLPLA
WHPRNRNALIVCDLGLDPQGLLDLDANTLRQRLYTRREDLTDGELPVPLKLLHINRCPVV
APLNVLRAQDRERLQLDMAVCQSRALRLTDAQEVWRDKLAAMYAEEDFVPSQDPEQQLYD
GFIGDRDRRLCEQVRAAEPSQLAHQQWPFDDHRLPELLFRYRARNFPDTLNNEEQQRWKL
FCQQRLSNPEWGAPNTLLAFKQAREELAVSATSVQCQVLDQWQEYADSLAARLDL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcttctggtacgactatgaaaccaccggcatcaacccgcgcagcgatcgc
ccgctccaggtcgccggtattcgtaccgacctcgaactcaacgaggtcggcccgccggtc
aacctttattgccggccgagcgatgacatcctgccgcacccggccgcctgcgcgataacc
ggtattacccccggcatcctggcggaaaagggcctggccgaagccgacttcatgacccgc
gtgcacgccgagttggccgcgacgggtacctgtggggccggttacaacaccttgcgtttt
gatgatgaaatgacgcgctacagcctgtaccgcaacttttttgacccctacgcccgtgag
tggcagggcggcaacagtcgctgggacttgatcgatgtggtccgcacagcctacgcgctg
cgccccgaaggcattgtctggcccgagcaggacggtcgtgtcaccctcaagcttgagcgg
ttgaccgaagccaatggcatagaccatggccaggcccacgatgccttgtcggacgtgcga
gccaccattgccttggcccgtttggtccgcgagaaacagcccaagctgtatgactggcta
ttccaactgcgcagcaagcagcgtgtgatggatcaggttcgcctgttgcaacccatggtg
catatctcaggtcgtttttccgccgcgcgtcattacctgggcgtggtactgcccctggcc
tggcacccgcgcaatcgcaatgcgttgattgtctgtgacctcgggctcgacccgcagggt
ttactggacctggacgccaataccttgcgccagcggctctacacgcgccgtgaagacctg
acggacggtgaactgccggtgccgctcaagttgttgcatatcaaccgttgtccggtcgtt
gcgcccttgaatgtgctaagggcgcaggatcgtgagcggcttcagttggatatggctgtc
tgccagtcgcgggcgctgcgactaactgacgcacaggaagtttggcgcgacaagttggcg
gcgatgtatgccgaggaagattttgtgccgagtcaggacccggagcagcagctctatgac
ggttttataggtgaccgcgaccggcgtttatgcgaacaagtccgggcggcagaaccttca
cagttagcacatcagcagtggccttttgatgatcatcgattgccggaattattattccgc
taccgtgcacgtaactttcctgacaccttgaacaacgaggagcaacagcgctggaaactt
ttttgccagcaacgtttgtcaaacccggaatggggcgcgccgaataccttgttggcattt
aagcaggcacgtgaggagttggccgttagtgctacatcggttcagtgccaggtgctggat
caatggcaggaatatgccgactctttagcggctcgcctggacctgtag
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