Pseudomonas antarctica: A7J50_4959
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Entry
A7J50_4959 CDS
T04830
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
panr
Pseudomonas antarctica
Pathway
panr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7J50_4959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panr03400
]
A7J50_4959
Enzymes [BR:
panr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A7J50_4959
DNA repair and recombination proteins [BR:
panr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7J50_4959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
AAA_17
SLFN-g3_helicase
AAA_28
T2SSE
NACHT
AAA_5
NTPase_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ANF88302
UniProt:
A0A172Z7G9
LinkDB
All DBs
Position
complement(5440811..5442880)
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AA seq
689 aa
AA seq
DB search
MSLSPLPLEELLPLSRAADLLQLLERWVDRGWLRALDKAFVGFLHELDAQADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDVQTGAMLLPSQLLTGLDGAHWCQALAA
SHLVALAVDGSEAAHSRPLVLSGKRLYLRRYWTYERRIDTALRLRLATPENVAADLPQRL
NRLFDQPPPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEAGSP
LRIRLAAPTGKAAARLTESISQQVLSLNVPDSVREKIPTQVTTVHRLLGSRPGTRHFRHH
IGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGWYSPDTRQWLQAVSGEDLSASGLHEDLDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARKLLAARSHSDLFCLSLKGEHDHALERLVLDGQGDDAQGYRYYLNLLQS
ARPALDTPREDAAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEG
DDQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDDGPQVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELDAADKKTD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgccgttaccgcttgaggaactgctgccgctcagccgcgctgccgacttg
ctgcaactgctggaacgttgggtcgaccgaggctggctgcgcgccttggacaaagccttc
gtcggcttcctccacgaactcgacgcgcaagccgatccgttggtgctgctggctgcggca
ttgaccagccatcaattgggccatggccacgtgtgcctcgacctgttcgaaacccttaag
gcgccggactttgcgttgtcactgccacccgaaggcgacgtgcaaaccggtgccatgctg
ttgccgtcgcaactgctcaccggcctcgacggtgcgcattggtgccaagcgttggccgcc
agtcacctggtcgccctggcggttgatggcagcgaagccgctcacagccggccattggtg
ctgtctggcaaacgtctgtacctgcgccgttactggacttacgagcggcgtatcgacacg
gcgctgcgcctgcgcctggcgaccccggaaaacgtcgccgccgatttgccccagcgcctg
aaccgtctgtttgaccaaccgccacccgacggtgtcatcgactggcaaaaactcgcctgc
gccctggccactcgcggcgcattcagcatcgtcaccggcggccccggcactggcaaaacc
accaccgtggtgcgcctgctcgccctgttgcaggcccccgctgtggaagccggcagcccg
ttgcgcatccgcctcgccgcgcccaccggtaaagccgccgcacgcctcaccgaatccatc
agccagcaagtgctgtcgctgaacgtgcctgacagcgtgcgggaaaaaatcccgacccag
gtcaccacggttcaccgcctgctcggcagtcgcccgggcacgcggcacttccgtcatcac
attggcaaccctttgcctttggatgtgctggtggtggacgaagcctcgatgatcgacctg
gaaatgatggccaacctgttggacgccttaccgccccacgcccgcttggtgttgctgggc
gacaaggaccaactcgcctcggtggaggccggcgccgtgctcggcgatttgtgccgcgac
gctgaagccggttggtacagccccgacacacgccaatggctgcaagccgtgagcggcgaa
gacctcagcgccagcggcctccacgaagacctcgacggcagccatccgctggctcagcaa
gtggtgatgctgcgctactcgcgacgttttggcgaaggcagcggtatcggccaactggcg
cgttgggtcaaccagcaaaacgccgaagaggcgcgcaaactgctggccgctcgcagccac
agcgacctcttctgcctcagcctcaagggcgaacacgaccacgccctggagcggctggtg
ctggacgggcagggcgacgacgcccaaggttatcgctattacctcaacctgctgcaaagc
gcgcgcccggccctcgacaccccgcgcgaagacgccgcctggacgcactgggcgcaacag
ctgctgcaagcgttcgacgccttccaactgctttgcgccgtgcgcaaaggcccttggggc
gtggaagggctgaacctgcgcatcaccgccgccttgcgcaaagtgcggctgatcgagggt
gacgaccaatggtacgaaggccgcccggtgctcatgacccgcaacgattacggcctgggc
ctgatgaacggcgacatcggcatcgcgcttaaactgcccgaaagcgacgatggcccacag
gtcttgcgcgtagccttcccacgcaacgatggccaaggcggtgtgcgttttgtactgccc
agccgtctgaacgatgtggaaaccgtgtacgccatgaccgtgcacaaatcccagggttcg
gagttcacccacaccgcgttgatcctgccggacgcgctgaacccggtgctgaccaaagag
ctgatctacaccggcatcacccgtgccaaacggtggttcagcctgatcgagccgcggggg
ggagtctttgaggaagccgtgcgccgcaaggtcaagcgcctgagtggtttgatgttggag
ctggacgctgcggataaaaaaactgactga
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