Pseudomonas antarctica: A7J50_5001
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Entry
A7J50_5001 CDS
T04830
Name
(GenBank) Transcription termination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
panr
Pseudomonas antarctica
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
panr03021
]
A7J50_5001
03009 Ribosome biogenesis [BR:
panr03009
]
A7J50_5001
Transcription machinery [BR:
panr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A7J50_5001
Ribosome biogenesis [BR:
panr03009
]
Prokaryotic type
rRNA transcription factors
A7J50_5001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF2187
Motif
Other DBs
NCBI-ProteinID:
ANF88342
UniProt:
A0A172Z7J6
LinkDB
All DBs
Position
complement(5501401..5502882)
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGAYETFR
RWTVVEEADLDDPAIETWPSKVAETHPGAQVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEDLAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDTVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggcgtaccggca
aacgtgatttttgaagcgctggagctggccctggccactgctaccaaaaagcgttttgaa
gacgaagtggatctgcgtgtggaaatcaaccgccacaccggtgcctatgagactttccgt
cgctggacggtcgtcgaagaagccgaccttgatgatccggccatcgaaacctggccaagc
aaggttgccgaaacgcaccctggcgctcaggtcggtgatgtcgtcgaagaaaagatcgaa
tcgatcgaattcggccgtattgctgcacagaccgccaagcaggtcatcgtgcagaaggtt
cgcgaagccgagcgcgctcaagtcgttgacgcttatcgcgagcgcctgggtgaaatcatc
tccggcaccgtgaaaaaagtcacccgcgacaacgtgatcgtcgacctgggcaacaacgca
gaagcgttgctggcccgcgaagacatcatctctcgcgaaaccttccgtgttggcgtgcgt
ttgcgtgcgctgctcaaggaaatccgcaccgagaaccgcggccctcagttgatcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgtatcgaagtgccggagatcgccgaa
ggcctgatcgaagtcatggctgcgtcccgcgacccgggttcgcgcgccaagatcgcggtc
cgttccaaggacaaacgcatcgacccgcagggcgcttgcattggtatgcgtggttcacgc
gtccaggcagtgtcgggcgaattgggtggtgagcgtgtggatattgtgctgtgggacgat
aacccggcgcagtttgtgatcaacgccatgtcgccagctgaagtggcggcaattatcgtt
gacgaagatgcccatgcaatggacatcgccgttggcgcagacaatctggctcaggccatt
ggtcgtggtggtcagaacgtgcgtctggccagccaactgaccggttggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagctgaaaccggcgacatcctgcgcaac
ttcatcgacgagctggaagtcgacgaagacctggcacaggtgctggtagatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacaccgtcaacgagcttcgcgctcgggccaaggatcgtttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgatctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
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