KEGG   Pseudomonas antarctica: A7J50_5222
Entry
A7J50_5222        CDS       T04830                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
panr  Pseudomonas antarctica
Pathway
panr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:panr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A7J50_5222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:panr03400]
    A7J50_5222
DNA repair and recombination proteins [BR:panr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A7J50_5222
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A7J50_5222
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N nSTAND1 AAA_29 AAA_16 BCA_ABC_TP_C AAA_23 RsgA_GTPase AAA_33 DnaJ_CXXCXGXG Viral_helicase1 nSTAND3 AAA_25 cobW
Other DBs
NCBI-ProteinID: ANF88559
UniProt: A0A172Z951
LinkDB
Position
5747709..5750543
AA seq 944 aa
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC
PDHDIPLEAQTVSQMVDLVLAQPEGAKLMLLAPVIRERKGEHLSVFEELRAQGFVRARIN
GKLYELDEAPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGDLT
LAEGAIRGWDRRNVYYFQMLGSLASHYKFSLEMPFNQLPAEQQKVILHGSGSQNVDFKYL
NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV
WVGEKTLPAVTNLPIGDACEYFGVLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV
IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIEVP
AKRTPRNKKMALHLKGARGNNLRNVDLEIPLGLLTCVTGVSGSGKSTLINNTLFPLSATA
LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES
RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
GKNIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIAVGTPEQVSEMPQSHTGYYLKPLLARDKA
NT seq 2835 nt   +upstreamnt  +downstreamnt
ttggacaagatcctgattcgtggggctagaacccacaacctgaagaacatcgacctgacc
ctgccccgggacaaactgatcgtcatcaccggcttgtccgggtccggcaaatcgtccctg
gcgttcgacacgctgtatgccgaaggtcagcgtcgctatgtagagtcgctgtcagcctat
gcccggcaattcctgtcgatgatggaaaagcctgacgtcgacaccattgaaggtttgtcg
ccggcgatttccatcgagcaaaagtcgacctcccataacccgcgctccaccgtgggcacc
attaccgaaatctacgactacctgcgcctgctgtacgcgcgcgtgggtattccgcgctgc
ccggaccacgatattcccctggaagcccagaccgtcagccaaatggtcgacctggtgctg
gcccagcctgagggcgccaagctgatgctgctggcgccggtcattcgtgagcgcaagggc
gaacacctttcggtctttgaagagctgcgcgcccagggtttcgtgcgcgcgcgcatcaac
ggcaagctctatgagctggatgaagcgccaaagctcgacaagcagaagaagcattccatt
gatgtcgtggtcgaccgcttcaaggtgcgtgccgacttgcagcagcgtttggcggaatcg
ttcgaaaccgcgctgaagctggcggatggcattgcgctggttgcgccgatggatgacgag
ccgggtgaagaaatcatcttctccgcacgttttgcctgtccgatctgcgggcatgccatc
agcgagctggaacccaagctgttttccttcaacaacccggcaggcgcctgcccgacgtgt
gatggccttggggtaaagcagttcttcgacatcaagcgcctggtcaatggtgacctgacg
ttggcggagggcgcgatacgcggctgggacaggcgtaacgtctactacttccagatgctc
gggtcgttggcatcccactataaattcagcctggaaatgccgttcaaccaactgccggca
gagcagcagaaagttatcctgcacggcagtggttcgcagaacgtcgacttcaagtacctg
aacgaccgtggcgatatcgtcaaacgctcgcacccgttcgagggcatcgtgccgaacctg
gagcggcgttaccgtgagaccgaatcggcgagcgtgcgcgaagagctggcgaaattcctc
agcacccaaccgtgcccggactgccggggcactcgcctgcgccgcgaggcgcgccatgtg
tgggtgggtgagaagacgttgccagcggtgaccaacctgccaattggcgatgcctgtgaa
tatttcggcgtgctcaagctgaccggccggcgcggggaaattgctgacaagatcctcaag
gaaatccgcgagcgcttgcagttcctggttaacgtcggcctggattatctgtcgctggat
cgcagcgcagacacgctgtctggcggtgaagcccagcggattcgtttggccagccagatt
ggtgccggccttgttggcgtgttgtacatccttgatgaaccgtcgattggcttgcatcag
cgggacaatgaccgcctcctgggaacgcttaaacacctgcgggatatcggtaacaccgtg
atcgtggtcgagcacgatgaagacgcgattcgcctggcggattatgtggtcgacattggc
ccgggtgcgggcgtgcacggtgggcacatcgtcgccgaaggcacacctgccgaagtcatg
gctcacccggattcgctgacgggcaaatacctgtccggtcgagtgaagatcgaagtgccc
gccaagcgcacgccgcgcaacaaaaagatggcgttgcacctcaagggcgcgcgcggcaac
aacctgcgcaatgtggacctggaaatacctctcggcctgctgacctgtgtgaccggcgtt
tccggctccggcaagtcgacgctcatcaacaacacgctgttcccgctgagtgccaccgcc
ctgaacggcgccaccacgctggaggccgcggcacacgacagcatcaaaggtttggagcac
ttggacaaggtggtcgatatcgaccaaagcccgattggccgcacaccgcgttccaacccg
gcgacctataccgggttgttcacgccgatacgtgaactgtttgcgggcgtgccggagtct
cgctcacgcggttacgggccgggccggttctcgttcaacgtcaagggcgggcgctgcgag
gcgtgccagggcgatggcctgatcaaggttgagatgcacttcctgccggacatctacgtg
ccgtgcgatgtgtgcaagagcaagcgctacaaccgcgaaaccctggagatcaaatacaag
ggtaaaaacatccacgaaaccctggagatgaccatcgaggaagcgcgggtgttcttcgac
gcggtgcctgcgttggcacgcaagctgcagaccttgatggatgtgggcctgtcgtacatc
aagctggggcagtcggcgaccacgttgtccggcggcgaggcgcagcgggtgaagctgtct
cgcgagctgtccaagcgcgatacgggcaagacgctgtacatcctcgatgagccgactacg
ggcctgcactttgccgatattcagcaattgctggatgttctgcaccgcttgcgtgaccac
ggcaacacagtggtggtgatcgagcacaaccttgatgtgatcaagaccgccgactggctg
gtggacctggggccggaaggcggctccaagggtggccagatcatcgcggtgggtacgccg
gaacaggtctcggagatgccgcagtcacataccggttactacttgaagccgttattggcg
cgcgacaaagcctga

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