Pseudomonas antarctica: A7J50_5380
Help
Entry
A7J50_5380 CDS
T04830
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
panr
Pseudomonas antarctica
Pathway
panr00260
Glycine, serine and threonine metabolism
panr00460
Cyanoamino acid metabolism
panr00630
Glyoxylate and dicarboxylate metabolism
panr00670
One carbon pool by folate
panr00680
Methane metabolism
panr01100
Metabolic pathways
panr01110
Biosynthesis of secondary metabolites
panr01120
Microbial metabolism in diverse environments
panr01200
Carbon metabolism
panr01230
Biosynthesis of amino acids
panr01240
Biosynthesis of cofactors
panr04981
Folate transport and metabolism
Module
panr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A7J50_5380
09102 Energy metabolism
00680 Methane metabolism
A7J50_5380
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A7J50_5380
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A7J50_5380
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A7J50_5380
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A7J50_5380
Enzymes [BR:
panr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A7J50_5380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ANF88713
UniProt:
A0A172Z867
LinkDB
All DBs
Position
complement(5917455..5918708)
Genome browser
AA seq
417 aa
AA seq
DB search
MFSKKDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALINAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMVVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEAAEPGFKVYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVPQCIELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaaaaagaccagatccagggatatgacgacgcactgttggcggcgatgaat
gccgaggagcagcgtcaggaagatcatatcgagctgatcgcgtcagagaactacaccagc
aaacgtgtgatggaagcgcaaggcagcggcctcaccaacaaatacgccgaaggttacccg
ggcaagcgctactacggtggctgcgagcacgtggacaaggttgaagccctggccatcgag
cgcgccaagcagctgttcggtgccgattacgccaacgtgcagccacactccggttcgtcc
gccaacagcgcggtgtacctggcgctgatcaatgctggcgacaccatcctcggcatgagc
ctggcccacggcggccacctgacccacggcgccaaagtgtcgtcgtcgggcaagctgtac
aacgcggtgcaatacggcatcaacaccgacaccggcctgatcgactacgacgaagttgag
cgtctggcggtcgagcacaagccgaagatggtggtggccggtttctccgcctactccaaa
accctggatttcccacgctttcgtgcgattgccgacaaggtcggcgcgctgctgttcgtc
gacatggcccacgtcgccggcctggtggccgctggtttgtacccgaacccgctgccttac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcggtttgatc
ctggccaaggccaacgaagaaattgaaaagaaactcaactctgcggtgttcccaggcgct
cagggcggcccgctgatgcatgtcatcgccggcaaggcggtgtgcttcaaggaagcggcg
gagccaggtttcaaggtgtaccagcaacaagtgatcgacaacgcccaggccatggccggc
gtgtttatcaaacgtggctacgatgttgtctccggcggtaccgataaccacctgttcctg
gtcagcctgattcgccagggcctcaccggcaaagaggcggacgctgccctcggtcgcgcc
cacatcaccgtcaacaagaacgccgtgccgaatgacccgcagtcgccgttcgtgacctcg
ggcctgcgtatcggcaccccggcggtgaccacacgtggcttcaaagtaccgcagtgcatc
gagttggccggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aacgtggccaagcacgtgtctgccctgtgcgctgatttcccggtttatcgctga
DBGET
integrated database retrieval system