Pseudomonas antarctica: A7J50_5675
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Entry
A7J50_5675 CDS
T04830
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
panr
Pseudomonas antarctica
Pathway
panr00300
Lysine biosynthesis
panr00470
D-Amino acid metabolism
panr01100
Metabolic pathways
panr01110
Biosynthesis of secondary metabolites
panr01120
Microbial metabolism in diverse environments
panr01230
Biosynthesis of amino acids
Module
panr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A7J50_5675
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A7J50_5675
Enzymes [BR:
panr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A7J50_5675
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANF89005
UniProt:
A0A172Z902
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All DBs
Position
6225706..6226953
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSFTDALEGTPSLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGTPDKIVFSGVGKSREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALTERLGECGIYLQHIDLGGGV
GVRYRDEEPPQIADYIQAVRERTEGRGLTLMFEPGRYIVANASVLLTQVEYLKHTEYKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRTGEGRNYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgctgtccgcg
attgccgagcgctttggcaccccgacctatgtgtactcccgtgcgcacatcgaagcccaa
taccgtagctttaccgacgctctggaaggcacgccgagcctggtgtgctacgccgtcaag
gccaactccaacctgggcgtactgaatgtcctggcgcgcttgggcgctggtttcgacatc
gtctcccgtggtgagctggaacgggtactggctgccggtggcacgccggacaagatcgtg
ttttccggcgtcggcaaaagccgcgaagacatgcgccgcgccctcgaagtcggcgtgcat
tgcttcaacgtcgagtccaccgacgagctggagcgcctgcaggtcgtcgctgccgagatg
ggcgttcgcgcgccgatctccctgcgcgtcaacccggacgtcgatgccggcactcacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaggac
gtgtacatccgtgccgcgcaattgccgaacctggaagtgctgggcgtcgactgccatatc
ggctcgcaactgaccaccctgccaccgttcctggacgccctcgaccgcctgctggcgctg
accgagcgccttggcgagtgcggcatctacctgcaacacatcgacctcggtggtggtgta
ggcgtgcgttatcgcgatgaagagccaccacagatcgccgactacatccaggccgtgcgc
gagcgcaccgaaggccgcggcctgaccctgatgttcgagccgggccgttatatcgtcgcc
aatgccagcgtactgctgacccaggtcgaatacctcaagcacaccgagtacaaggatttc
gccatcgtcgacgcggcgatgaacgaccttattcgcccggcgctctatcaggcctggatg
gatgtgactgcggtcaagccacgtactggcgaaggtcgcaactacgacatcgtcggcccg
atctgcgagaccggcgacttcctggccaaggatcgtcaactggccctggaagaaggcgac
ctgctggctgtgcattcggccggtgcctacgggtttgtcatgagctccaactacaacact
cgcggccgtgccgccgaggtgctggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
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