Pseudomonas antarctica: A7J50_5752
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Entry
A7J50_5752 CDS
T04830
Name
(GenBank) Type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
panr
Pseudomonas antarctica
Pathway
panr02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
panr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
A7J50_5752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
panr02044
]
A7J50_5752
Secretion system [BR:
panr02044
]
Type VI secretion system
Imp/Vas secretion system core components
A7J50_5752
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
PADRE
Motif
Other DBs
NCBI-ProteinID:
ANF89082
UniProt:
A0A172Z9R2
LinkDB
All DBs
Position
complement(6305736..6307070)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGAWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEDLG
AARYVSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGISDYAAIGVVRIKEKRADRAL
VLDDTYIPPVLDVAASKPLSAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLLQHFSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLSLSFVP
VMAALREALSMLIDSKATPIPIVEKAYGIHVAMLADKTLLDSASFILVVRADVPGETLRA
RFGQQSKVGSVEHIRDMVNLQLPGIGLLPLPVAPRQIPYHAGSTYYELDRGSEHWQQLNN
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcattggaacgcagcacttc
cagcaacatgaccgttatctggaaaacctgatcgacgcccgcagtcgtccgttatccgct
ggcgcgtggggcttttccgagttgctgatcgaccaaggcctgctggcgcagggcaagctg
gcgatcgtttcggcgcgcggcctgttgcctgatggcacgccgttcaatatcccccaggac
gacctggcgccgagcccgctgaacatcgacgataacctgcgcgatggcctggtgtacctg
gccttgccgctcaagcgcgcgggtgcccgtgacacggtcgacgagggcgaagaccttggc
gccgcacgttatgtgagccaggtgcgtgaagtgcgtgacgacaacgcgccgttcgaaaac
cgcgcgccggtggccgtgggttcccgtgccctgcgcttgctgaccgcgcaagatggcatc
agcgattacgctgccatcggcgtggtacgcatcaaggaaaaacgcgctgaccgcgcgctg
gtcctcgatgacacctacattccgccggttctggacgtggccgcgagcaaaccgctgagc
gcctttcgcagcgaattactgggcctgctgcaccagcgtggcgaagccctggctggccgt
gtcgtcgcctcgggcgccggtggcgcgtcggagattgccgatttcatgctgctgcaattg
gtcaaccgcgcgcagccgctgctccagcatttcagccagttgagcccgctgcacccggaa
cgctttttcagcgagctggtgagcctggccggggagttttccaccttctccacctcgggc
cgtcgcccccaggaatacccgcaataccagcacgacgacctgtccctgagtttcgtcccg
gtgatggcggccctgcgtgaagcgctgtcgatgctgatcgacagcaaggccacgcccatc
ccgattgtggagaaagcctacggcatccacgtggcgatgcttgctgataaaaccctgctc
gacagcgccagtttcatcctggtggtgcgcgctgacgtgcctggcgaaaccctgcgcgcg
cgcttcggccagcagagcaaggttggttcggtggaacacatccgcgacatggtcaacctg
caactgccgggcattggcctgctgccattgccggtggcgccacggcagatcccgtaccac
gcaggcagcacctattacgagttggaccggggcagcgagcactggcagcaactgaacaac
tccggcggttttgccttccatatcgccgggcagttcccgggtttgaacctggccttctgg
gcgatccgaggataa
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