Pantoea sp. SO10: FCN45_00855
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Entry
FCN45_00855 CDS
T06053
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03420
Nucleotide excision repair
pans03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FCN45_00855 (uvrD)
03430 Mismatch repair
FCN45_00855 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pans03400
]
FCN45_00855 (uvrD)
Enzymes [BR:
pans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FCN45_00855 (uvrD)
DNA repair and recombination proteins [BR:
pans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FCN45_00855 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FCN45_00855 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
DUF6658
Motif
Other DBs
NCBI-ProteinID:
QCP58020
LinkDB
All DBs
Position
189243..191405
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSDDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFSNVLVDEFQDTNNIQYAWIRMLAGDS
GRVIIVGDDDQSIYGWRGAQVENIQRFLQDFPGAETIRLEQNYRSTNNILKAANTLIANN
NGRLGKELWTDGSDGEKISLYCAFNELDEARFVVNRIKSWHENGNALQDCAILYRSNAQS
RVLEEALLQGSMPYRIYGGMRFFERQEIKDALAYLRLMANRNDDAAFERVVNTPVRGVGD
RTLDVVRQTARDQQLTLWQATRELLQNKALAGRAASALQRFCELVDSLASETAEMPLHVQ
TDRVIKDSGLWVMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTMHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMVKLTLTYAESRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVSHQRMG
TPIAQNDSGFTLGQRVRHAKFGEGTIINLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgcttgacggcttgaatgacaaacagcgcgaggcggtcgccgca
ccgcgcagcaacctgctggtgctggccggagcaggcagtggcaaaacccgtgtgctggtg
catcgcatcgcctggctgctgtcggtagagaactgctcgccgtattcgattatggcggtt
accttcaccaacaaagcggcggcggaaatgcgccatcgtatcgatcagctgatcggcacc
agccagggcggcatgtggattggcactttccacggcctggcgcaccgtttactgcgcgcg
catcaccttgatgccggcttgccccaggatttccagatcctcgacagcgacgatcagctg
cgtctgctgaagcgcctgatcaaagcgatgaaccttgatgagaaacagtggcctgcgcgt
cagggcatgtggtacatcaacggcaaaaaagatgaaggcctgcggccaaaacacatcgaa
agctacggcaatccggttgaacaaacctggctgcgcatctatcaggcgtatcaggaagcc
tgcgatcgcgccggtttagtggatttcgccgagctgctgctgcgcgcccacgaactctgg
ctgaacaagccgcatatcctgaaccattaccgtgagcgtttcagcaacgtgctggtggat
gagttccaggataccaacaacattcagtacgcgtggattcgcatgctggcgggtgatagc
ggccgcgtgattatcgtcggcgatgacgatcagtcgatttacggctggcgcggtgcgcag
gtggagaacatccagcgcttcctgcaggattttcccggcgcggaaaccattcgcctggag
cagaactatcgctcgaccaacaacattctgaaagcggcgaacacgctgatcgccaacaac
aatggccgcctcggtaaagagctgtggaccgacggcagcgatggtgaaaagatctcactc
tactgcgcattcaacgagctggatgaagcgcgctttgtggtcaatcgcatcaaaagctgg
cacgagaacggcaatgcgctgcaggattgcgccattctctaccgcagcaacgcccaatcg
cgcgtgctggaagaggcgctgctgcaaggcagcatgccgtatcgcatttatggcggcatg
cgcttcttcgagcgtcaggagattaaagatgcgctggcctatctgcgtttaatggccaat
cgcaatgacgatgcagcctttgagcgtgtggtgaacacgccggtgcgcggcgtcggcgat
cgtaccctcgatgtggtgcgccagaccgcgcgcgatcagcaactcaccttgtggcaggct
acgcgcgagctgttgcagaacaaagccttagccggacgcgccgcctcggcgctacaacgc
ttctgcgagttggtcgattcactggccagcgaaaccgccgagatgccgctgcatgtgcaa
accgatcgcgtgattaaagactccggtttatgggtgatgtacgagcaggagaagggcgag
aaaggccaggcgcgtattgaaaaccttgaggaactggtcacggcaacgcgccagttcagc
tatcaggacgaagacgaagatctgatgccgctgcaggcgttcttatcacatgcggcgctg
gaagcgggtgaaggtcaggccgacaaatggcaggacgcggtgcagctgatgaccatgcac
tcggcgaaagggctggagttcagccaggtatttatcgtcggcatggaagagggcatgttc
ccgagccagatgtcgctggatgaaggcggtcgtctggaagaggagcgccgtctggcttac
gttggcgtgacgcgtgccatggttaagctgacgcttacctatgctgaaagccgtcgtctt
tatggtaaggaagtgtatcaccgtccatcacgcttcatcggcgagctgccggaagagtgc
gtggaagaggtgcgtttgcgcgccagcgtcagccgtccggtgagccatcagcgcatgggc
acgcccatcgcgcaaaatgacagcggcttcacgctcggccagcgcgtgcgtcacgccaag
ttcggtgaaggcaccatcatcaacctcgaaggcagcggtgaacacagccgtttgcaagtg
gcgtttcagggccagggcatcaagtggctggtggcggcttacgcccgtctggaaacggtg
tag
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