Pantoea sp. SO10: FCN45_01770
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Entry
FCN45_01770 CDS
T06053
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pans
Pantoea sp. SO10
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QCP58187
LinkDB
All DBs
Position
393741..399812
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AA seq
2023 aa
AA seq
DB search
MRFTLNPIALGMLAAQLLIYPAMQSQAVTLGTYTPENNDNQTGKITVSSGNESLTGNQAF
TAGTDGAVTTTLGQVAITSGSQYLNQDRLDPGPQNFAITTPDPATGTNSTFQVYNSASLV
ALAPVTSATSVPDVQNVNDAQYIDARVADVTGGTLDVNIGQANALSSASTNSWTMAAKQT
QLFDVSGTGTVNWNSNNRISFFGATATPDGAGSATSSYQVQNLATYNGAFSVQTLDGKST
SFTVTNASQLQSYNNWLIGQLQAGNLDKTRYLPEFNKAVTFTNANIVYNVSATPPDEVTQ
AIGNRIVINANGADARVNLAAGKTLEVVGATGGAIKASNGAQAVIDGKLASRGSITNNGT
ALVLTDNSSGTNNGVINGGFLNRQDGTGIGSTGYGANGVAVQTGSTFNNNGILNLATTGS
NSQYGVAGINLGVSSTANNSGNINVGVNGSSARGTASGVLLTDATSSFTNNASGNIYIGR
GPQNSLGEATADTAMNQSGLTSGIALVANGNAVNNGNITLGTRTQNAAGMSATGANNATM
INTGAINVNGAAATIPRENVGMLVTNSAGNINNAGTINLNGVNGTGLKVLATNGNTASAT
STGTINVAGGADPASGTRNYGVWVEGQGATGTAQATVDGPINLSGNGAIGVHARGNSTVT
VDPAAVPTFSNGTNQIAFFAYGPNARINVLGNNPFDVTTQNSTLFRVEQGADFNGNALSL
TASGAGSTAVLGSGAGTEVSSDAAVINVSGSGANGITVEGGATGVIDAATTMNLTGSNAI
GAIVDGQKHDIFGRNSGSPVTSTRLNSAASLNASQSGLTGYLARNRAQLTNSGDITFSGA
NATGIRVESGATGTNSGNININDGGTGIAVNSGSSTFATTANNTGTINVNGGSTTNRSRG
VSASGNRAVANLNAGTLNLNGTGAIGAEALNGALVNIAAGSAPVFNNSDQIAYHAAGSGS
RISSATNALNINSSGSTGYRIDDGAALSFTTPTTLTASASSSTGAIISGSGSSLNSSNAN
FTASGQGSTAIRAEGGANATLDSGSSINLSGSNAVGVLINNLRTDLSNALDGTSAATRVT
SNGNVSGAGNGAMGFDVTNGAELVNNGNVNLTGSNNIGIRSRAGSTLTNNGVVNVANGTG
LDVSGSGSTLAKGGTINVDNGVAGVRISDGAQLALTGSDTVITTRGNAHGILLDSGATAL
SASDATVNVLGSGNGIENRAELSNVGLSNLTINVGDGNGIRTAVPFDPASTVTTNVSGSG
SGLNIANADGSTTRGDLALGSGYQFNVTGAGGTGIRANTTGNVTTAANVNIDNAAGGSAL
VSSTAGTIVNTGNFTSNSLTAPVVDLRGGKTIFENLGNIITANPQTVAVAGSNADDEILL
TEGAVQGDINPGGGSDRFRWTGGTLNGSLTMGNDNNNTAEVSHVDLGTTYHLTSGNGTGN
TLTFNQIGARGGSFSADDLSKGVNLGSGWSTINFANTQWTLTDNLQLAHSTINVDADSTL
YAGDNVHPTLSGGTADSLVVNNAGTLDLTNGAGSPGNTLDIAGSLASSGGQLNLVTNLNQ
GGALNNQFTDHINVTGNASGTTLVNVKLADASTGALTDLNQNGGVEGNEGISLAQVGGNA
SANSFALKDGYLGAGPWQYRLYTFAPGSSDPNQRFVSGSGNNYWDYRLANYYVCEDSANC
QPTFVTDAFGTPQSYDSRPAVVPQVPSYVSAPVGLAYYTSAIIDDLHKRLGELRHEQTRP
QGNGGEMFLRYIGSNLKYKSDKSFRDFGYDFDLDYSAVQVGGNLLRLDGEQDSLRGGLAY
TRGNTRIRPHAADGYSSTTFDSDSLAFYGTWQRQSGFYLDGVLSFDWHRGETDIARTQEV
AKLKGHGWTASLESGYPFALGDGYKLEPQAQLMYMKLNMNDFTDKDGNNVRYGDYNQTIG
RLGARLDRTWTDDSNRQYTPYLRANYYKGWGGSADTSVSSVDNPAFGATFSSGKFGQMWE
VGAGGTATLQKDVSLYAEADYRKEIAGNGAKGWRYNVGVRWQF
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttacattaaatcctatcgcattagggatgttggcggcgcaattgctgatctat
ccagcaatgcaaagtcaggctgttacgttggggacttacacaccagaaaataatgacaac
caaaccggtaaaattaccgtcagcagcggcaatgaaagtctgaccggcaatcaggcattc
acggcaggaacggatggcgcggtcaccaccacgctcgggcaagtggcgatcacctcggga
tcgcagtatctcaatcaggatcgcctggatcccggcccgcaaaactttgcgatcaccacg
cccgatcccgcgaccggcaccaacagcacattccaggtatataactccgccagtcttgtc
gccttagcgcccgtcaccagcgccactagcgtgccggatgtgcagaacgtcaatgatgcg
cagtacatcgatgcgcgcgttgcggatgttaccggcggtacgctggatgtgaatatcggc
caggcgaatgcgctcagcagcgccagcaccaacagctggaccatggccgctaaacagaca
cagctatttgatgtgagcggcaccggcacggtgaactggaacagcaataaccgcatcagc
tttttcggtgccaccgctacgccggacggcgcgggatcggccaccagcagctatcaggtg
caaaacctcgccacctataacggcgcattcagcgtgcagacgctggatggcaaaagcacc
agctttaccgtcaccaacgccagccagctgcaaagctacaacaactggctgatcggtcag
ctgcaggcgggcaatcttgataaaacccgttatctgcctgagttcaataaagctgtcacc
ttcaccaatgccaacatcgtctacaacgttagcgccacgccgccagacgaggtgacgcag
gcgatcggcaatcgcattgtgatcaatgccaatggcgcggacgcgagggtcaatctggcg
gcgggtaaaacgctggaagtggtgggcgcgacgggcggtgcgatcaaagcctccaacggc
gcgcaagcggtgattgatggcaaactggcgagtcgcggcagcatcaccaataacggcacg
gcgctggtgttaaccgataacagcagtggaaccaataatggggtaattaacggcggcttc
ctcaatcgtcaggatggtaccggcattggctcgaccggctacggtgccaacggcgtagcc
gtgcaaaccggtagcacctttaacaacaacggcatcctcaacctcgccaccaccggcagc
aattcacagtatggcgtggcgggcatcaatcttggcgtgtcctccaccgccaataacagc
ggcaatatcaacgtcggcgtcaacggttcgagcgcgcgcggcaccgcgtctggcgtgtta
ctgaccgacgccacttccagcttcaccaataacgccagcggcaatatctacattggtcgc
ggaccgcaaaacagccttggtgaggcgacggcggataccgcgatgaaccaaagcgggttg
accagcggtatcgctctggtcgccaacggcaacgcggttaacaacggcaacattaccctc
ggcacgagaacgcagaacgcggcggggatgtcagcgaccggtgcgaataacgccaccatg
atcaacaccggcgccatcaatgtgaacggtgcggctgccaccattccgcgtgaaaacgtc
ggcatgctggtgaccaacagtgccggcaacatcaataacgcgggtaccattaacctgaat
ggcgtgaacggcaccggcctgaaagtgctggcgaccaatggcaacaccgccagcgccacc
tcaaccggcaccatcaacgtggcaggcggcgccgatccggccagcggcacgcgcaactat
ggcgtgtgggtggaagggcaaggtgcaaccggcacggcgcaggccaccgttgatggcccg
atcaatctcagcggcaatggcgcgatcggcgtgcatgcgcgcggcaattctacggtgacc
gtggacccggctgccgtgccgaccttttctaacggtaccaatcagatcgccttctttgcc
tacggccccaatgcgcggattaacgtgctgggcaacaatccgtttgatgtcaccacgcag
aactccacgctgtttcgtgttgagcagggcgcagacttcaacggtaacgccttgtcgctc
accgcgtcgggtgccggttctaccgccgtgctcggcagcggcgcaggcaccgaagtgagc
agcgatgcggcggtgatcaacgtcagcggcagcggtgccaatggcattacggtggaaggg
ggcgcaacgggtgttattgatgccgcaaccaccatgaatctcaccggtagcaacgcaatt
ggcgcgatcgttgacggacaaaaacacgatatctttggcagaaacagcggctcgccggtg
accagcacccgcctgaactctgcggcgtcattgaatgcgtcacagagtggcttgaccggt
tatctggcccgcaatcgcgcgcagttgaccaacagtggcgatatcaccttcagcggcgcc
aacgccaccggcattcgcgtcgagagcggtgcgaccggcaccaacagcggcaatatcaac
atcaacgatggcggcaccggcatcgcggtgaacagcggcagcagcacctttgccaccacc
gccaataacaccggcaccatcaatgttaatggcggcagcaccactaaccgcagccgaggc
gtcagcgccagcggcaatcgcgcggtagccaacctgaacgctggcacgctgaatctcaac
ggcaccggcgcgattggggcggaagcgctcaacggcgcgctggtgaatatcgccgccggt
tcagcgccggtattcaataacagtgaccaaattgcctatcacgcggcgggcagcggatcg
cgcattagctccgccaccaatgcgttaaatatcaacagcagcggctcaaccggctatcgc
attgatgacggcgcggcgctgagtttcaccacgccgaccaccctcaccgccagcgccagc
agcagcaccggcgcgattatctccggcagcggcagcagcctgaatagcagcaacgccaac
ttcaccgccagcggccaaggcagtacggcgatccgtgctgagggcggtgcgaacgccacg
ctcgatagcggcagcagcatcaatctcagcggcagcaacgcggtcggcgtgctgattaat
aatctgcgtaccgatttgagcaacgcgctggatggcacgtcagcggccacccgcgttacc
agcaacggcaatgtgagcggcgcgggcaatggcgcgatgggttttgatgtcactaacggc
gcagagctggtcaacaacggcaatgtgaacctcaccggcagcaataatattgggatccgt
tcgcgcgccggcagcacgctgaccaacaacggcgtggtcaacgtagccaacggcaccggg
ctggatgtctccggcagcggcagcacgctggcgaaaggcggcaccatcaatgtcgataac
ggtgtcgcgggcgtgcgcatcagcgacggtgcgcagctggcgcttaccggcagcgacacg
gtgatcaccacgcgcggcaatgcgcacggcattttgctggacagcggtgcgaccgctctc
agcgccagcgacgccacggtgaacgtgctgggcagcggcaacggcatcgaaaaccgcgcc
gaactgagcaacgttggtctgagcaatctcaccattaacgtcggcgacggcaacgggatt
cgcaccgccgtgccatttgatccggcttcgacggtgaccaccaacgtctccggcagtggc
agcggcttgaatatcgccaatgccgatggttccaccacccgcggcgatctggcgttgggg
tcgggctatcaatttaatgttaccggcgccggcggcaccggtattcgcgccaataccacc
ggcaatgtcaccaccgccgccaacgtcaatatcgataatgcggcgggcggatcggcgctg
gtctccagcacggcgggcaccatcgtcaataccggcaacttcacctccaacagcctgacg
gcgccggtggtggatctgcgcggcggtaaaaccatcttcgagaacctcggcaacatcatc
accgctaatccacaaaccgtggcggtcgcgggcagcaacgccgatgacgaaattctgctg
accgaaggcgcggtgcagggcgatatcaatccgggcggcggatcggatcggttccgctgg
acgggcggaacactcaacggcagcctgaccatgggcaacgacaacaacaacaccgctgaa
gtgagccatgtcgatctcggcaccacctatcatctcaccagcggtaatggcaccggcaac
accttgaccttcaatcagattggcgcgcgcggcggcagcttcagcgccgacgatctcagc
aaaggcgttaatcttggcagcggctggagcaccatcaacttcgccaatacccaatggaca
ctaaccgataacctgcagctggcgcacagcaccatcaatgtcgatgcggattccacgctg
tatgccggcgataacgtgcatccgacgctatccggcggcaccgccgattcgctggtggtg
aacaacgccggtacgctggatctcaccaacggcgcgggttcaccgggcaacacgctggat
attgctggctcgctggcgtcgagcggcggccagctcaatctggtcactaacctcaaccag
gggggtgcgctaaataatcagtttaccgaccacattaacgtcaccggcaatgccagcggt
accacgctggtgaatgtgaaactggctgatgccagcaccggcgcactcaccgatctcaat
caaaatggaggggtagagggcaacgaagggatctcgctggcgcaggtgggcggtaatgcc
agcgccaacagcttcgcgttgaaggatggctatctcggtgccgggccgtggcaatatcgg
ctctacacctttgcaccgggcagcagcgatcctaaccagcgttttgtcagcggcagcggc
aataactattgggattaccgtctggcgaactactacgtgtgtgaggatagcgctaactgt
cagccgaccttcgtcaccgatgcctttggcacgccgcaaagctacgattcgcgtccggcg
gtggtgccgcaggtgccatcttatgtgtcggcaccggttggcctggcctattacacctcg
gcgattatcgacgatctgcataaacgcctcggcgaactgcgccacgagcagacacgtccg
caaggcaacggcggcgagatgttcctgcgctatatcggctcgaacctgaagtacaagagc
gataagagtttccgcgacttcggttacgactttgacctcgattacagtgcggtgcaggta
ggcggcaatctgctgagactcgatggcgagcaggatagcctgcgcggcggtttagcctat
acgcgcggtaatacgcgcattcgtccgcatgcggccgacggttacagcagcaccactttc
gacagcgacagcctggcgttttacggcacctggcagcgtcagagcggattctatctggac
ggtgtgttgtcatttgactggcatcgcggcgaaaccgatatcgcccgcacgcaagaagta
gcgaagctgaaaggccacggctggacggcatcgctggagagcggctatccgtttgcgttg
ggtgatggctacaagcttgagccgcaggcgcagctaatgtacatgaagctgaatatgaat
gatttcaccgataaagacggcaataacgtgcgttatggcgactataaccaaactattggt
cgtctcggcgcgcgcctcgatcgtacctggaccgacgacagtaatcgtcaatacacccct
tatctgcgcgcgaactactacaaaggttggggcggcagcgcagatacctcggtgtcatcg
gtggataatccggcatttggcgcaaccttcagtagcggcaagtttggacagatgtgggaa
gtgggcgcaggcggcaccgcaaccttgcagaaggatgtttcgttgtatgcggaagcggat
tatcgcaaagagatcgctggcaatggtgctaaagggtggcgctataacgttggggtaaga
tggcagttctga
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integrated database retrieval system
