Pantoea sp. SO10: FCN45_02175
Help
Entry
FCN45_02175 CDS
T06053
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCN45_02175 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pans03019
]
FCN45_02175 (groL)
03110 Chaperones and folding catalysts [BR:
pans03110
]
FCN45_02175 (groL)
03029 Mitochondrial biogenesis [BR:
pans03029
]
FCN45_02175 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pans04147
]
FCN45_02175 (groL)
Enzymes [BR:
pans01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FCN45_02175 (groL)
Messenger RNA biogenesis [BR:
pans03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FCN45_02175 (groL)
Chaperones and folding catalysts [BR:
pans03110
]
Heat shock proteins
HSP60 / Chaperonin
FCN45_02175 (groL)
Mitochondrial biogenesis [BR:
pans03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FCN45_02175 (groL)
Exosome [BR:
pans04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FCN45_02175 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FCN45_02175 (groL)
Exosomal proteins of breast cancer cells
FCN45_02175 (groL)
Exosomal proteins of colorectal cancer cells
FCN45_02175 (groL)
Exosomal proteins of bladder cancer cells
FCN45_02175 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCP58264
LinkDB
All DBs
Position
489016..490668
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKTLSVPCQDSRAIAQVGTISANSDETVGKLIADAMDKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELETPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGDQGAISGRVTQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAKIAASGLKGDNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDGNYGY
NAQTEEYGNMIDFGILDPTKVTRSALQYASSVAGLMITTEAMVTDLPKSDAPDLGGAAGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgcacgcgtaaaaatgctgcgtggcgta
aacgtactggcagatgcagtaaaagttaccctgggcccgaaaggccgtaacgtggttctg
gataaatcttttggtgcaccgaccatcaccaaagatggtgtttctgttgcgcgtgaaatc
gagctggaagacaagttcgaaaacatgggcgcacagatggtgaaagaagtggcctctaaa
gcgaacgacgcagcaggcgacggcaccaccactgcaactgtactggctcaggccatcatc
accgaaggcctgaaagccgtcgctgcgggcatgaacccgatggatctgaaacgcggtatc
gataaagccgttatcgccgccgttgaagaactgaaaaccctgtctgtgccttgccaggat
tcacgcgcgattgcacaggttggtaccatctctgctaactctgatgaaaccgtgggcaaa
ctgattgcagacgcgatggacaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
accggcctgcaagatgagctggacgtggttgaaggtatgcagtttgaccgtggctacctg
tctccgtacttcatcaacaagccagaaacaggcgcagttgagctggaaaccccgttcatc
ctgctggctgacaagaaaatctctaacatccgcgaaatgctgcccgtgctggaagccgtt
gcgaaagccggtaagccactgctgatcattgcagaagacgtggaaggtgaagctctggca
acgctggtggtgaacaccatgcgcggtatcgtcaaagtggctgcggttaaagcacctggc
ttcggcgaccgtcgtaaagcgatgctgcaggatatcgctatcctgaccggcggtaccgtg
atctctgaagagatcggtatggagctggagaaagctaccctggaagatctgggtcaggca
aaacgcgttgtgatcaacaaagacaccaccaccatcatcgatggcgtgggcgatcaaggc
gctatctctggccgcgtaacgcagattcgtcagcagatcgaagaagcaacctctgattac
gacaaagagaaactgcaggagcgcgtagcgaaactggcaggcggcgtagccgtgctgaaa
gtgggcgcagcaactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgccctg
cacgcgacccgtgctgcggttgaagaaggcgtggttgccggtggtggtgtggcgctggtt
cgcgttgcagcgaaaatcgccgcatctggcctgaaaggcgataacgaagatcagaacgtg
ggtatcaaagttgcgctgcgcgcaatggaagccccgctgcgtcagatcgtttccaacgcc
ggcgaagagccttcagttgttgctaacaacgtgaaagcaggcgacggtaactacggttac
aacgcgcagactgaagagtacggcaacatgatcgacttcggtatcctggacccaaccaaa
gtgactcgttctgcgctgcagtacgcttcgtcggttgcgggcctgatgatcaccaccgaa
gcgatggtgactgacctgccaaaaagcgacgcacctgatttaggcggcgctgccggtatg
ggtggcatgggcggaatgggcggcatgatgtaa
DBGET
integrated database retrieval system
