Pantoea sp. SO10: FCN45_02535
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Entry
FCN45_02535 CDS
T06053
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pans03016
]
FCN45_02535 (truB)
Enzymes [BR:
pans01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FCN45_02535 (truB)
Transfer RNA biogenesis [BR:
pans03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCN45_02535 (truB)
Prokaryotic type
FCN45_02535 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QCP58330
LinkDB
All DBs
Position
565740..566684
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVFLLDKHQGASSNDVLQRVKRLFNANKAGHTGALDPLATGMLPVCLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGNIVETRPITFDQAALDAALDYFRGDTM
QVPTMFSALKYQGRKLYEYAREGITVPREARPIKVFELQFIRWEGDELELEIHVSKGTYI
RTIIDDLGERLGCGAHVIMLRRLQVARYPIERMVTLEQLQEVAATVNMAETPDYSALDAL
LLPMDSPAEEFPIVNLLPTVAAYFKQGMPVQVADAPEQGLVRVTEGDEHKFIGMAEIADD
GRVAPRRLVVEFPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtccacggtgtgtttctgctggataagcac
caaggcgcatcttccaatgatgtgctgcagagagtaaaacgtctgttcaacgcgaacaaa
gcgggccacaccggcgcactcgatcctctggcgaccggcatgctgccggtttgcctcggc
gaagccaccaagttttcgcagtatctgctcgattcggacaagcgttatcgcgtcattgct
cgcctgggtgaacgcaccgatacgtctgatgccgacggtaatattgttgagacgcgtccg
attacttttgatcaggcggcactggatgcagcgctggactattttcgtggcgacaccatg
caggtgccgaccatgttctccgcgctgaagtatcagggacgcaagctgtacgagtacgca
cgtgaaggcataaccgtgccgcgtgaagcgcgcccgatcaaagtgtttgagctgcagttt
attcgctgggaaggtgatgaactggagctggagattcacgtctctaaaggcacttacatc
cgcactatcatcgacgatctcggtgaacggcttggctgcggtgcgcacgttatcatgctg
cgtcgtctgcaggtggcgcgttatccgatcgaaagaatggtgacgctggagcagctgcag
gaagtggcggccaccgtcaacatggcggaaacgccggattacagtgcgctcgatgcgtta
ttgctgccgatggatagtccggcagaagagttcccgatagtgaatttgctgcctacggtg
gcggcttatttcaaacaaggtatgccggttcaggtggcggatgcgccggaacagggattg
gtgcgcgtgacggaaggtgatgagcacaaattcattggcatggccgaaatcgccgacgat
gggcgcgtggcgccgcgtcgtctggtggtagaatttcctgcgtaa
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