Pantoea sp. SO10: FCN45_02545
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Entry
FCN45_02545 CDS
T06053
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCN45_02545 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pans03019
]
FCN45_02545 (pnp)
03016 Transfer RNA biogenesis [BR:
pans03016
]
FCN45_02545 (pnp)
Enzymes [BR:
pans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FCN45_02545 (pnp)
Messenger RNA biogenesis [BR:
pans03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FCN45_02545 (pnp)
Transfer RNA biogenesis [BR:
pans03016
]
Prokaryotic type
tRNA degradation factors
FCN45_02545 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
S1_RRP5
Spt6_S1
KH_SLS1_2
DUF5813
Motif
Other DBs
NCBI-ProteinID:
QCP58332
LinkDB
All DBs
Position
567397..569535
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AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKNKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPVRPLFPEGFINEVQVIATVVSV
NPQVNPDIVAMIGASAALALSGLPFNGPIGAARVGYINDQYVLNPTADEINESRLNLVVA
GTQNAVLMVESEADILTEEQMLGAVVYGHDQQQIVIENINALVAEAGKPRWDWQPLPTND
ALIARVTALAEAGISDAYRITDKQERYTQVGAVKDATIAALQAEDETLDAGDIADIVHDL
EKSVVRSRIIRGEPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTAR
DAQNLDELMGERTDSFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKQAD
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEADNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILSVMEQA
ISTPRQEISEFAPRIYTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEIEVGRVYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATEQKPAEEVATAASDASDGE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccgatcgtacgcaaattccaatatggtcagcataccgtcacgctggaaacc
ggcatgatggcgcgccaggctaccgctgcagtaatggtgagcatggatgacactgctgta
ttcgttaccgttgttggccagaaaaaaaataaaccaggtcaggatttcttcccgctgacg
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatctcacgcctgattgaccgtccagttcgt
ccgctgttcccggaaggcttcattaacgaagtgcaggttattgcaaccgttgtttctgtt
aacccacaggttaacccagacatcgttgcgatgatcggcgcatctgctgcgctggctctg
tcaggtctgccgttcaatggcccaatcggcgcagcgcgcgtgggttatatcaacgatcag
tacgtactgaacccaactgctgatgaaatcaacgaatcacgtctgaacctggttgttgcc
ggtacccagaacgcggtgctgatggtggaatcagaagctgacatcctgactgaagagcag
atgttgggcgctgtggtatacggccacgaccaacagcagatcgttatcgaaaacatcaat
gcgctggttgccgaagcgggtaaaccacgttgggattggcagccactgccaactaacgat
gcactgatcgcacgcgttactgcactggcagaagcgggcatcagcgatgcctatcgcatc
actgataagcaagagcgttacactcaggttggcgcagtgaaagacgcgaccatcgctgca
ctgcaggctgaagatgaaacgctggatgctggcgatatcgctgacatcgttcacgacctt
gagaagagtgttgttcgtagccgcatcatccgtggcgaaccgcgtatcgatggccgtgag
aaagatatgattcgtggcctggatgtgcgcactggcgtactgccacgcacgcacggttct
tcactgtttacccgtggtgaaacgcaggcgctggttaccgcaacattgggtaccgcacgt
gatgcgcagaatctggatgagttgatgggcgagcgtactgatagcttcctgttccactac
aacttccctccatactgcgtgggcgaaaccggtatggttggctcaccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtaatgcctaagcaagctgat
ttcccctacaccgtgcgtgtggtttcagagatcactgaatctaacggttcttcttcaatg
gcttccgtgtgcggtgcatctctggcactgatggacgctggcgtaccgatcaaagctgcc
gtagccggtattgcgatgggtctggttaaagaagccgacaactttgtggttctgtctgat
atcctgggtgacgaagatcacctcggcgatatggactttaaagtagcgggtagccgcgac
ggtatcactgcgctgcagatggatatcaaaattgaaggcatcacccgcgaaatcatgcag
gttgctctgaaccaagcgaagggtgcgcgtctgcacattctgagcgtgatggaacaggca
atcagcacgccgcgtcaggaaatttctgagttcgcgccgcgcatttacaccatcaaaatc
agttcagacaagatcaaagatgtcatcggtaaaggcggctcagtgatccgtgcgctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgacggtaccgtgaagattgctgctact
gatggcctgaaagccaaagaagccattcgtcgtatcgaagagattactgctgagatcgaa
gttggccgcgtttactctggtaaagtgacacgtatcgttgatttcggtgccttcgtggca
atcggcggcggtaaagaaggtttggtgcacatctctcagatcgccgacaagcgcgttgag
aaagtgaccgattacctgcagatgggccaggaagttccagtgaaagtcatggaagtggac
cgtcagggacgtgtacgcctgagcatcaaagaagcgacagagcagaaaccagcggaagaa
gttgctaccgctgcatctgatgcatctgacggcgagtaa
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