Pantoea sp. SO10: FCN45_03675
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Entry
FCN45_03675 CDS
T06053
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCN45_03675 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pans03019
]
FCN45_03675 (pcnB)
Enzymes [BR:
pans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FCN45_03675 (pcnB)
Messenger RNA biogenesis [BR:
pans03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FCN45_03675 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QCP58536
LinkDB
All DBs
Position
complement(813969..815420)
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AA seq
483 aa
AA seq
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MLLTPFFSLSRCPIFTRVANFCRRVLKRDEEAPEEVEAESPGQMTVIPRESHNISRKDIS
ENALKVLYRLNKAGFEAYLVGGGVRDLLLGSKPKDFDITTNATPEQMRKLFRNCRLVGRR
FRLAHVMFGPEVIEVATFRGHHHEESEEDRNSSQRGQNGMLLRDNIFGSIEDDAQRRDLT
INSLYYSVADFTVRDYVGGLHDLHEGIIRMIGDPETRYREDPVRMLRVVRFAAKLQMRIA
AETAEPIPRLATLLNDIPPARMFEESLKLLQAGYGYRTYQMMREYQLFQPLFPMLTRGFT
AESDSLMERMLAQVLKNTDTRLQNDMRVNPAFLFAAMFWYPQLESAERIAQESGLTYYDA
FALSMNETLDEACRALAIPKRITTLIRDIWQLQLRMSRRHGKRAWKLMEHPKFRAAYDLM
ALRADVENNPELQKLTHWWGEFQAAAPVQQKTMMTTLGDDPAPRRKPRRPRRRPTGPRTN
SPQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
attttattaacaccctttttctcactgtcgaggtgtcccatttttacccgagtcgctaat
ttttgccggagagtcctcaagcgtgatgaggaggcgcctgaagaggtggaagctgaaagt
cctggtcagatgactgtcattccacgagaaagccacaacatctcacgcaaagatatcagc
gaaaacgccctcaaagtgctctatcgtctgaacaaagccggattcgaagcctacctggtt
ggcggcggcgtgcgcgatttgctgctcggcagcaagccgaaagactttgatatcaccacc
aacgccacgcctgaacagatgcgtaagctgttccgcaactgccgtttggtgggtcgtcgt
tttcgtctggcacatgtgatgttcggtccggaagtgatcgaagtcgccaccttccgtggt
catcatcatgaagagagcgaagaagatcgcaacagctcgcagcgcggccagaacggcatg
ctgctgcgcgacaatattttcggcagcattgaagacgatgcccaacgccgcgatctcacc
atcaacagcctctattacagtgtggccgatttcaccgtacgtgattacgtcggtggcttg
cacgatctgcacgaaggcatcattcgcatgattggcgatccggaaacgcgctaccgcgaa
gatccggtgcgcatgctgcgtgtggtgcgcttcgccgccaagctgcagatgcgtatcgcg
gcagaaacggccgagccgattccgcgtctggcaacgctgctgaatgacattccgccggcg
cgcatgtttgaagagtcgctcaagctgctgcaggccggttacggctaccgcacctatcag
atgatgcgtgaatatcagctgttccagccgctgttcccgatgctgacgcgcggtttcacc
gccgaaagcgacagcctgatggagcgtatgctggcgcaggttctgaaaaatacggatacc
cgcctgcaaaatgatatgcgcgtcaatccggctttcctgtttgccgcgatgttctggtat
ccgcagttggaatccgccgaacgcattgcgcaggaaagcggcctgacctattacgatgct
ttcgccttgtcgatgaacgaaacgctggatgaagcctgccgcgcgctggcgattcccaag
cgtatcaccacactgattcgtgatatctggcagctgcagctgcgcatgtcgcgtcgtcac
ggcaaacgtgcatggaagctgatggagcatcctaagttccgtgccgcttacgatttgatg
gcgctgcgtgccgacgtggaaaacaatcctgagctgcaaaagctgacgcattggtggggc
gagttccaggcggcggcaccggtgcagcagaaaaccatgatgaccacgctgggcgacgat
ccggccccgcgccgtaaaccgcgccgtccgcgtcgccgtccaaccgggcctcgcacaaac
agtccgcaatga
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