Pantoea sp. SO10: FCN45_04580
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Entry
FCN45_04580 CDS
T06053
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pans03400
]
FCN45_04580
DNA repair and recombination proteins [BR:
pans03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FCN45_04580
Archaeal homologous recombinant proteins
FCN45_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
MobB
NTPase_1
cobW
Motif
Other DBs
NCBI-ProteinID:
QCP58691
LinkDB
All DBs
Position
complement(1005215..1008898)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILTLRFKNLNALRGEWFIDFRREPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGTLSQTQNELITRDTAECLAEVEFEIKGEAWRAFWSQNRARGQADGKLQAPRVELARVA
DNQIIADKVGDKLKAIETLSGLDFARFTRSMMLSQGQFAAFLNAKPGERAELLEELTGTE
IYGQISVQIYERWRTARSELDTLRARAGGMSLLDEARRAELTQQLAELGTQEKILSEQLT
LAQHQQQWLVQQQQLTQEQQQAEQTLLAAQQAWQQADGDLQRLARAEPAEKLREKLQQRE
QLQGDLRALEQQSQQLQAQRQQAKTALQQGENHYQAAQQAREQALQQQQQLETLLTEQVI
PLDQRITTLSQQLDEQQRLHLQQQQALQSSQTALSQQQQVSERLQQQLAQQQEFRTREAA
VAHWGAELTRWQAEITRLDEREQTLTQLIAQHQQQRSQLEQHQQAQAQREQAAQPLQQAE
AQAAQQRLQAEQALTSLEAEIGSAQLRDALTQHQTQRPARQQLNQLAAQWRALQPQRLQR
QQKLAQLQQQHQDAEQALQALREEYKREHQALLDVRKICELERTIAQLADERAKLQPDQP
CPLCGSCQHPAIAQYQQLEPGANQQRLIALETCVAQLKESGTAKGEQQKLSLQQQQALQQ
EISDYDQQLATVNTQWQALSGELALTCTLEQQDDFAQWQQQQDAQEQLQQQQLQTRENAA
RALQQAKDAHLQQQQLWQQHQNQQQLAQQQIASTQQTLDEISQREASERSAMQQLAQQLE
QQLTQHQLVLPDVAERESWLRTLQQRWIAWQENERLHGELQPQLAKAESERSSLQQNLAR
EQQRLDELQQTLSALQQQRQQQQQQRQQLFGDRQVAEARQQQHVALQQCEQALAQQLQQW
QQAQSLLHGLNGQCEQIAAQQHTLRERAAAAESAFLAALQQSDFADESALRAALLEEREV
QQLRQQLQTLDQQRQQQLTLSEQLMQRWTAHQQQRPLELSDEIAATIQQQLEQLRVTLRD
NARQQGEAQQQLHSDAQQRLQQQSLLTQIATDEVELAQLGRLNDLVGSAKGDKFRRFAQG
LTLDHLVWLANRQLDRLHGRYLLQRRISEELELEVVDTWQADATRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIESLFLDEGFGTLDAETLDTALDALDALNASGKTIGVISHVGAMK
ERIPVQIRVRKMNGLGYSKLELPGDLA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgacgctacgttttaagaacctcaatgcgctgcgcggcgaatggtttatc
gatttccgtcgtgagccctttgccagcaacggcttgtttgccattaccggcgccactggc
gcgggcaaaaccaccttactcgatgcgatttgcctggcgctctatcaccagacgccgcgc
ctcggcacgctgtcgcaaacccagaacgagctgatcacccgcgacaccgccgagtgtctg
gcggaggtggagtttgagatcaaaggcgaagcctggcgcgccttctggagccagaaccgc
gcgcgcggccaagccgacggtaagctgcaggcaccgcgcgtcgagctggcgcgtgtggcc
gataatcagatcatcgccgataaagttggcgacaagctgaaagcgattgagaccctgtcg
gggctcgatttcgcccgttttacccgctcaatgatgctgtcgcaaggccagtttgccgcc
ttcctgaatgccaaacccggcgaacgcgccgagctgctggaagagctgaccggcaccgaa
atctacggacaaatctcggtgcagatctacgagcgctggcgcaccgcgcgcagcgagctg
gatacgctgcgcgcccgcgccggcggcatgtcgctgctcgatgaagcgcgccgggcagaa
ttgacgcagcagctggcggaacttggcacgcaggagaaaatcctgagcgaacagctaacg
ctggcgcagcatcagcagcaatggctggtgcagcagcaacagctaacgcaagagcagcag
caggccgaacagacgctgcttgccgcgcaacaggcctggcagcaggcggatggcgatctt
cagcggctggcgcgcgccgaaccggcagaaaaactgcgcgagaagttgcagcagcgcgaa
cagttgcagggcgatctccgtgcgctggaacagcaatcgcagcagctgcaagcgcaacgg
cagcaagccaaaaccgcgctgcaacagggcgaaaaccattatcaggctgcgcagcaggcg
cgcgaacaggcgttacagcaacagcagcagcttgaaacgctgctcaccgagcaggttatc
ccgctcgatcaacgcatcaccaccctctcgcagcagctggatgaacagcagcgattgcat
ctgcagcagcaacaggcgctgcaatccagccaaaccgcactcagccagcaacagcaggta
agtgaacgtttacaacaacagctggcgcagcagcaggaattccgcactcgcgaagccgct
gtcgcccattggggcgcggagttaacgcgctggcaggcggagattacccgactggatgag
cgcgagcagacgctgacgcagctgatcgcacagcaccaacagcagcgcagccagctggag
cagcatcaacaggcgcaggctcagcgtgaacaggcggcgcaaccgttgcagcaagccgaa
gcgcaggccgcgcagcagcgcctgcaagcggagcaagcactgacttcacttgaggcggag
atcggcagcgcgcaactgcgcgacgccctgacgcagcatcaaacccaacgccctgcgcgc
cagcaacttaaccagctcgccgcgcagtggcgcgcgctgcaaccgcagcggttgcagcgt
cagcagaaactggcgcagctccagcagcagcatcaggacgcggaacaggcgttacaggcg
ctgcgcgaggagtacaaacgggaacatcaggcgctgctcgatgtgcgcaaaatctgcgag
ctggagcgcaccatcgcccagctggccgacgagcgcgctaaactgcagccggatcagccc
tgcccgctgtgcggctcgtgccagcatccggcgattgcgcaatatcagcagcttgagccc
ggtgccaatcagcagcgtttaatcgcgctggaaacgtgcgtggcgcagctaaaagagtcc
ggcaccgccaaaggcgagcagcagaaactgtcgctgcaacagcagcaggcgttgcagcag
gagatcagcgattacgatcagcaactggcgacggtgaacacccaatggcaagcgctgagc
ggtgagctggcacttacctgcacgctggagcagcaggacgattttgcgcaatggcaacag
cagcaggatgcgcaggaacagctgcagcaacagcagctgcagacgcgggaaaacgccgcg
cgtgcgctgcagcaggcgaaggatgcgcatctgcaacagcagcagctgtggcagcagcat
cagaatcagcagcagctggcgcagcagcagatcgccagcacgcagcagacgctggatgaa
atcagccagcgcgaggccagcgaacgcagcgccatgcagcaactggcgcagcagctggaa
cagcagctgacgcagcatcaactcgtcctgccagatgtcgctgagcgggaaagctggctg
cgcaccctacaacaacgctggatcgcatggcaggaaaatgaacggttacacggcgagttg
cagccacagctggcgaaagccgaaagcgagcgcagcagcctgcagcagaatctggcgcgt
gaacagcagcggctggatgagctgcagcagacgctcagcgctttgcagcagcagcgccag
cagcagcaacaacagcgtcaacagctgtttggcgatcgtcaggtggcagaagcccggcag
cagcagcatgttgcgctgcaacagtgtgaacaggcgctggcgcagcagcttcagcagtgg
caacaggcgcaaagcttgctgcacggcctgaatggccagtgcgagcagatcgcggcgcag
caacacaccttacgtgagcgcgctgccgccgcagaaagcgccttcctcgccgcgctgcag
cagagtgattttgcggatgaaagcgcgctacgtgccgctctgctggaggagcgcgaggtg
cagcagctgcgccagcagttgcagacgctcgatcaacagcgccagcagcagctcaccctc
agcgaacagcttatgcagcgctggacggcgcatcagcagcagcggcctttggaacttagc
gacgagatcgccgccacgattcagcagcagctggaacagctgcgcgtgacgttacgtgac
aatgcccgtcaacagggcgaagcgcagcagcagttacacagcgatgcacaacagcgtttg
cagcagcaatcgttgctgacgcaaatcgccaccgatgaagtggaactggcgcagctgggc
cgtctgaacgatctggtgggttcggccaaaggcgataaattccgccgcttcgcacaaggt
ctgacgctcgaccatctggtgtggctggcgaaccgtcagctcgatcgcctgcacggtcgc
tatctgctgcagcgccgcatcagtgaagagctggagctggaagtggttgatacctggcaa
gctgacgccacgcgcgatacgcgcacgctatcgggcggcgagagttttctcgtcagcctg
gcgctggcgttagcgctgtcagatttggtgagtcataaaacgcgcatcgaatcgctgttc
ctcgacgaaggcttcggcacgctggatgccgagacgctggataccgcgctggatgcgctc
gatgccctcaacgccagcggcaaaaccatcggcgtgatcagccatgtcggagcgatgaaa
gagcgtattccggtgcagatccgtgtccgcaagatgaatggcctgggttacagcaagctg
gagttgccgggcgatctcgcttaa
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integrated database retrieval system
