Pantoea sp. SO10: FCN45_04740
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Entry
FCN45_04740 CDS
T06053
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pans03000
]
FCN45_04740
Transcription factors [BR:
pans03000
]
Prokaryotic type
Helix-turn-helix
Other families
FCN45_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_2
AAA_5
HTH_30
HTH_7
Mg_chelatase
nSTAND6
Torsin
AAA
HTH_50
Imm32
HTH_23
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QCP58722
LinkDB
All DBs
Position
complement(1040226..1041998)
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AA seq
590 aa
AA seq
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MQGHPSASAVNANPLLSDSWFRSQLYGLDRTADDFPRVRQGELADVLASNAGLQQFAQPV
IKQLAQKLAEKQSVVILSDATGLVLNTFGDMPSLEKAQRYALAPGNLWSECGRGTNAIGT
ALAIDDGCEIQGHQHFLTLNQGLYCAAMPLQMPNGQIAGVLDISGPAHFPHPQTFSWVKA
AAKQIEYLWVKQSLHPQQWLMSLHLQPQGIDTSDELLLVFSDNVLTAANRLAMRELALSV
GQLGSVTFQQLFPQQQQHANSIPAPLDYATQRYYFRLRAPQRSHFATPSEPASELPFSLG
RDGEKMVRLLNAGVSLCIHGETGSGKEYVSRALHQQSRWREGKFVAINCAAIPEALIESE
LFGYQPGAFTGASKNGYIGKIREADGGVLFLDEIGDMPLALQTRLLRVLQEKEVAPLGSS
RSWPVNFAVISATHRDLAQRVAEGEFREDLLYRLQEFSMTIPPLRAWPDVEGFIRRLWLE
LGGADRDIQLSPALLTALAQLPWPGNVRQLRSLLRVLLALADEGEEVTEVHLPAEYRRAA
VQPQSDRQSHDRRLISETLQRFNGNISKTAEALGVARSTLYRRAARDKRD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcagggacatccatccgcgtctgccgttaacgccaatccgctattaagcgactcctgg
ttccgtagccagctgtatggtctcgatcgcaccgccgatgattttccgcgtgttcgccag
ggtgaactggccgatgtgcttgccagcaatgccgggctgcagcaattcgcgcagccggtg
atcaaacagctggcgcagaagctggccgagaagcaatcggtggtgattttgtcggatgcc
accggtctggtgctcaatacctttggcgatatgccctcgctggaaaaagcccaacgttat
gcgctggcgccgggtaatttatggagtgaatgcgggcgtggcaccaatgcgattggcacc
gcgctggcgattgatgatggctgcgagattcaaggccatcagcacttcctgacgctcaat
caaggtttgtactgtgcggcgatgccgctgcaaatgcccaacggtcagattgctggcgtg
ctggatatttccggcccggcgcacttcccgcatccgcagacctttagctgggtgaaagct
gcggcgaaacagatcgaatatttgtgggtgaagcagagcctgcacccgcagcaatggttg
atgagcctgcatctgcagccgcagggtattgataccagcgatgaactgctgctggtgttc
tcggataacgtcctgaccgccgccaatcgtctggcgatgcgcgaactggcgctgagcgtc
gggcaactcggcagcgtgacctttcaacaactgtttccgcaacagcagcagcacgccaac
agcattcccgctccgctcgattacgctacgcagcgctactattttcgcctgcgagcaccg
cagcgcagccattttgccacgccgagcgaacccgccagcgagctgcctttctcactgggg
cgcgatggcgagaagatggtgcgactgctcaatgccggcgtttcactgtgcattcacggc
gaaaccggcagcggcaaagagtatgtcagccgcgcactgcatcagcaaagccgctggcgc
gaaggcaaattcgttgccattaactgcgcggccatccccgaagcgctgattgaatctgag
ctgtttggctatcaacccggcgcgttcaccggcgcgagcaagaatggttacatcggcaaa
atccgtgaagcggatggcggcgtgctgttccttgatgaaattggcgatatgccgctggca
ctacaaacccgcttgctacgcgtgttgcaggagaaagaggtggcgccgctcggatccagc
cgcagctggccggtgaatttcgcggtgatcagcgccacgcaccgcgatttggcacagcgc
gtggccgaaggcgaattccgcgaagatttgctctatcgcctgcaggaattctcgatgacc
attccgccgctgcgcgcctggccggatgtggaaggttttatccgtcgattatggctggag
ctgggcggcgcggatcgcgatattcagctctcacctgcgctgttgacggctctggcgcag
ctgccgtggccgggtaacgtgcggcaattgcgcagcttgttacgcgtgctgttggcactg
gcggatgaaggtgaagaagtgacagaggtgcatttaccggcagagtatcggcgtgcggcg
gtgcagccacagtccgatcggcagagtcatgataggcggttgatcagcgaaacgctgcag
cgcttcaatggtaatatcagtaaaacggcggaagccttaggcgtcgcgcgcagcacgctt
tatcgtcgtgcggcgcgcgacaaacgcgattag
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