Pantoea sp. SO10: FCN45_05845
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Entry
FCN45_05845 CDS
T06053
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pans
Pantoea sp. SO10
Pathway
pans00020
Citrate cycle (TCA cycle)
pans00190
Oxidative phosphorylation
pans00650
Butanoate metabolism
pans00720
Other carbon fixation pathways
pans01100
Metabolic pathways
pans01110
Biosynthesis of secondary metabolites
pans01120
Microbial metabolism in diverse environments
pans01200
Carbon metabolism
Module
pans_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pans_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pans_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FCN45_05845 (sdhA)
00650 Butanoate metabolism
FCN45_05845 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
FCN45_05845 (sdhA)
00720 Other carbon fixation pathways
FCN45_05845 (sdhA)
Enzymes [BR:
pans01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
FCN45_05845 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
Ins_P5_2-kin
Motif
Other DBs
NCBI-ProteinID:
QCP58922
LinkDB
All DBs
Position
1265872..1267638
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AA seq
588 aa
AA seq
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MSLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HDDNWEWHMYDTVKGSDFIGDQDAIEYMCHVGPEAILELEHMGLPFSRLDDGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNEDGAIVGC
TAICMETGETVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSMMVEIREG
RGCDGPWGPHIKLKLDHLGAEVLESRLPGILELSRTFAHVDPIKEPIPVIPTCHYMMGGV
PTKVTGQALRVNEQGQDEVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGVHLL
ECIEEQGELREATPENIDAAMARFNRWENNTTGEDPVEIRKALQRCMQNNFSVFRDGDAM
REGLEELKVIRERLKSARLDDRSPDFNTQRIECLELDNLMETAYATAVAANFRTESRGAH
SRFDFPDRDDENWLCHSLYVPQTESMTRREVNMQPKLRAAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccagtcagagaatttgatgccgtggtgatcggcgcgggtggcgcaggaatg
cgcgccgctctgcaaatctcccaatcgggccagacttgtgccctgttatccaaagtattc
ccaacccgttcccataccgtatcggcgcagggcggtattaccgttgcgctgggtaacacc
catgacgataactgggaatggcacatgtacgacaccgtcaaaggttccgactttatcggc
gaccaggacgcgatcgaatatatgtgtcatgtcggtccggaagcgattctggaactggaa
cacatgggattgccgttctcccgtctggatgacggccgggtgtatcagcgtccgtttggt
ggtcagtcgaagaatttcggcggtgagcaggcggcgcgtaccgcagctgcggccgaccgt
accggccacgccttgctgcatacgctgtatcagcagaacctgaaaaacaaaaccaccatc
ttctccgaatggtatgcgctggatctggtgaaaaacgaagacggcgcgattgtcggctgt
acggctatctgcatggaaaccggcgaaaccgtctatttcaaagccaaggcaactattctg
gcaaccggcggcgcgggccgtatttaccaatccaccactaacgcccacatcaacaccggt
gacggcgttggcatggcgctgcgcgccggcgtgccggtgcaggatatggaaatgtggcag
ttccacccaaccggtattgccggtgcgggcgtgctggttactgaaggttgccgtggtgaa
ggtggttacctgctgaataagcacggtgaacgcttcatggaacgttatgcgccgaacgcc
aaagatctggcgggtcgtgatgtggttgcgcgttcgatgatggtggaaatccgtgaaggt
cgcggttgcgatggcccctggggtccgcacatcaaactgaaactcgaccatctcggtgcc
gaagtgctggagtcgcgtctgccgggcatccttgagctgtcgcgtacctttgcccacgtc
gacccaattaaagaaccgattccggtgatcccgacctgccactacatgatgggcggcgtg
ccgaccaaagtgaccggccaggcgctgcgcgtgaatgagcagggccaggatgaggtgatt
ccgggtctgttcgccgtcggcgaaatcgcctgcgtatcggttcatggcgctaaccgcctc
ggcggcaactcgctgctcgatctggtggtgttcggtcgcgcagccggtgtgcatctgctg
gagtgtattgaagagcagggcgaactgcgtgaagccacgccggaaaatatcgatgcagcg
atggcgcgcttcaaccgctgggaaaataacaccaccggtgaagatcctgtcgaaatccgt
aaagcgctgcagcgctgcatgcagaacaacttctcggtgttccgcgatggcgatgcgatg
cgtgaaggtctggaagagctgaaagtgattcgtgagcgtctgaaatcagcgcgtcttgat
gaccgttcgccagacttcaacacccagcgtatcgaatgccttgagctggataacctgatg
gaaaccgcttacgccaccgctgttgccgccaacttccgtaccgaaagccgtggtgcacat
agccgcttcgacttcccggaccgcgatgatgaaaactggctgtgccacagtctctatgtt
ccgcagacggaaagcatgacgcgccgtgaggtgaacatgcaaccgaaactgcgtgcggcc
ttcccgccgaaagcgcgtacctactaa
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