Pantoea sp. SO10: FCN45_06555
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Entry
FCN45_06555 CDS
T06053
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pans03009
]
FCN45_06555 (rimO)
Enzymes [BR:
pans01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FCN45_06555 (rimO)
Ribosome biogenesis [BR:
pans03009
]
Prokaryotic type
ribosomal protein modification factors
FCN45_06555 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QCP59054
LinkDB
All DBs
Position
complement(1419185..1420510)
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AA seq
441 aa
AA seq
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MSHVKNPPRVGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDAEIVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKVDQIREVHPKVLEITGPHSYEQVLSHVHTYVPKP
EHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAKR
LVEAGVKELLVISQDTSAYGVDVKHRTGFWNGSPVKTSMVSLCEQLAKLGVWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIKRWREICPELTL
RSTFIVGFPGETEEDFQMLLDFLQEARLDRVGCFQYSPVDGATANQLPDQVPDDVKQDRF
DRFMQLQQKISSERLQEKIGREVLVLIDEVDEEGAVGRSMADAPEIDGAVYLNGDRQVKV
GDVVRVKVEHADEYDLWGTRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagccatgtcaaaaatccaccgcgcgtggggttcgtctccctcggctgtccgaaaaac
ctcgtcgactctgaacgcatcctgacggagctgcgtactgaaggctatgacgtggtgcca
cgctacgatgatgcggagatcgtcatcgttaacacctgtggatttattgacagcgccgta
caggaatctctggaggcgattggtgaagcgctgaacgagaacggcaaagtgatcgtcacc
ggttgcctcggtgccaaagtggatcagatccgcgaagtgcatccgaaagtgctggagatc
actggcccgcacagctacgagcaggtgctgtcgcatgtgcacacttatgtgccaaaacca
gaacacaatccgttcctgagtttagtgccagagcaaggcgtcaaactgacgccgcgccat
tacgcctacctgaaaatttccgaaggctgcaaccatcgctgcaccttctgcatcattcca
tcaatgcgtggcgatcttgatagccgcccaatcggttcggtgctcgacgaagctaaacgt
ctggttgaagcgggcgtgaaagagctgctggtaatctcacaagacacctccgcttacggc
gtggatgttaaacatcgcaccggtttctggaacggatcgccggtgaaaaccagcatggtg
agcctgtgcgagcagttagccaaactcggcgtgtgggtgcgtctgcactacgtttatcct
tatccgcatgtggatgatgtgatcccgctgatggccgaaggcaagattctgccgtacctc
gatattccgctgcagcacgccagcccgcgcatcctcaagctgatgaagcgtcccggcgcg
gtagagcgcacgctggagcgcattaagcgctggcgtgaaatctgtccggagctgacgctg
cgttcaacctttatcgtcggtttccccggtgaaaccgaagaagatttccagatgctgctc
gacttcctgcaggaagcgcgcctcgatcgcgttggctgcttccagtacagcccggtagat
ggcgcaactgctaaccagctgccggatcaggtaccggacgacgtgaagcaggatcgtttt
gatcgcttcatgcagctgcagcagaagatctccagcgaacgtctgcaggagaaaatcggc
cgcgaagtgctggtgctgattgatgaagtggacgaagaaggcgcggtgggacgcagcatg
gctgacgccccggaaatcgatggcgcggtttatctgaacggcgatcgtcaggtgaaagtc
ggcgacgtggtccgcgttaaagtggaacacgccgatgaatatgatctgtggggcacgcgc
gtttaa
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