Pantoea sp. SO10: FCN45_06640
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Entry
FCN45_06640 CDS
T06053
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
pans
Pantoea sp. SO10
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pans03009
]
FCN45_06640 (rimK)
Ribosome biogenesis [BR:
pans03009
]
Prokaryotic type
ribosomal protein modification factors
FCN45_06640 (rimK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Dala_Dala_lig_C
ATP-grasp_2
ATP-grasp
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QCP59071
LinkDB
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Position
1436545..1437447
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AA seq
300 aa
AA seq
DB search
MKMAILTRDGSIYSCKRLRDAAEERGHQVQMIDPLSCYMNINSDSPAVHYRGEALGHFDA
VIPRIGTATTFYGTAVLRQFEVRGSYPLNESVAITRARDKLRSLQLLAREGIDMPITGFA
SSPDDTDDLIAMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEFI
KEAQGRDIRCLVIGNEVVAAIEREAKEGDFRSNLHRGGKARAVEITEQEREIAVKAASTL
GLEVAGVDILRAQRGPLVMEVNASPGLEGIEGITGLDIATMMITWIEQHACPGYRPKTGG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggccattctcactcgcgatggatcgatctattcgtgtaagcgtctgcgcgac
gccgcggaggagcgtggccatcaagtgcagatgatcgatccgctctcctgctacatgaac
atcaattccgattcgcccgcagtgcactaccgcggcgaggcgctggggcattttgatgcg
gtgatcccgcgcattggcaccgctaccactttttatggcactgcggtgctgcgccagttt
gaggtgcgcggcagctaccccctcaatgaatcggtggccattacccgcgcgcgcgacaaa
ctgcgttcgctgcagctgctggcgcgtgagggcattgatatgccgatcaccggttttgct
tcttcgccggatgatactgatgatttgatcgcgatggtgggcggtgcgccgctggtggtg
aaactggtggagggcacacagggcatcggtgtggtgctggcggaaacgcggcaggcagcg
gagagcgtgattgacgcctttcgtggcctcaatgctcatattctggtgcaggagttcatc
aaggaagcgcaagggcgcgatattcgctgcctggtgattggcaatgaagtggtggcggcg
attgagcgcgaagcgaaagagggcgattttcgttccaatctgcatcgcggcggcaaagcg
cgtgcggtggagatcactgaacaggagcgcgaaatcgcggtgaaagccgccagtacgctg
gggctggaagtggccggtgtggatatcctgcgcgcccagcgtggtccgctggttatggaa
gtgaacgcctcgccgggactggaagggattgagggcattaccggtttagatatcgccacc
atgatgatcacgtggattgagcagcacgcttgtcccggctatcgtcctaaaaccggcggc
taa
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